Gene Acry_3609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3609 
Symbol 
ID5159391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009471 
Strand
Start bp26128 
End bp28587 
Gene Length2460 bp 
Protein Length819 aa 
Translation table11 
GC content41% 
IMG OID640538911 
ProductTonB-dependent receptor 
Protein accessionYP_001220344 
Protein GI148244108 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value0.396824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAACG TCATGGAGCC CTACATTCAC AGACGTCACA AGAAACTTAT GAGACCAACG 
TCGTACAAAC ATATAATTTT TTTACTCGGA ACAACTGCTA TGGCGACGTT GCCTTTTAGC
CATACTGCAT CCGCACAGAC TGTAAGTTCT GGAGGTGGTA CTGTTGTCAA TGCGGGCGAG
GTAACCGCAT CCTCAGGGGC ATTGAATACG TTACTTAAAC TACCCACAAA AAGAGAGATA
TTCAACTCGA CTCAATCAAT TAAAGTGGTA GGCAAAAAGC AGATCAAGGC ATTGGGGCCG
GCTGCCGGTG CGGCTCAAGC GCTAGCAGTG GCGCCCGGAG TAAGCATTGA AGCTGATGGC
ACGAGTGGTT CCCCGAGGGC GGGTATCAGT ATCAATGGCA TGAAAACAGG GTGGGGGAAT
ATCGCCGGCA ATTCCAATGA TGGGACTGTC ATGGTTACTT TCGATGGTGT GCCAATGGTC
GATCCGGCAT ACGGTGTCTG GCAGGCTTCA GAGATTCCTA ATCTTTCTTT TATCAAGGGC
CTATCTGTCA CTTACGGTCC GGGATACCCT ATTAATCGCT GGTACGATAA CATCGGTGGT
GGCCTAAATT TTGTACCGAT TGAACCAACG GCCAAGGCGC GGGCCGATAT CGGTGGTTAC
TTCGGGTCAT ACGGCGCGCG TGGCACCAAT TTTTCTTTTG ATACTGGCGA ACACGACGGT
TGGTCAGCCG TATTTGCCGG AACTATCGGC AGAAGTGGAA ATTATTTAAG TGGCTATGGA
TTTAACAATC CATCAAATAA TTATGCGTAT TATGCAAAGA TAATCAAGAA ATTCCCTGGG
GGTCGGATTA GTATTGGCGG ATTTGCATCC AGGGCTTCTG CCTACAGACC TGTTCCAATC
CCAGTATCGC CAAATTCGCA GGTTACTATC AATGGCGACA ATCCTATAAC AGGGAATTCA
TACCCAGGAC CAATTTATTC TCAGCAGACT ACAGGTTTTT ACAATACATT ACCTAAATCT
ATATATTATA AAAGAATCCC AATAAGAACA TATCTCATAT ATTCAAAGTT TTTTGATAAA
TTAGACTCAA CAACATCGTT TCATAACATT TTATTTTACA GATACGGAGA AAGAATACAC
GAGCACTATG ATAACTATGG ACAGAGTAAC AATGTACTTA TACAATATTT CAATGCTCAC
AGCCAAACAT TTGGTGATAA AGCCTATTTC ACATTTAAAT TACCATACAA TACGGTTTCA
TTAGGCGGAT ATGCCGTATA TAATAAATTT AATTCATTCT TAGATTATTA TAATCCAAAC
AATCCAGCTG TGTATGATTC GGGGCCGAAT GCAGGGCAGC CTGTTCTTAT TAACGGTATT
CCAGTTAACT ATAGCCTTGT TGTTCCGCAT AATTATCACA ACTCGTATTT GTATGAGACC
GATCTTGCTG CTTTTGCACA GGATGTGATT CGGCCGACTA AAAATATTAG GCTGACGCCT
GGCTTGAGCG TTGTTTCAAT GCATACTGAT TTTGTTAATA ATTCACTTGC TGCTTTTCCA
TATAATACTA CTACTGGACT AGATTCTTTT GTTGGTGTCA ATGGGGATCG TAGGCCTAAT
TCGTCGACAA ACTTTGTTGA ATTTGAACCA TCTATAGGCG CGAACTATAA AATCAACAAA
AATATTGCTC TTTATGCCAA CTATTCTACC GCTTATAAAG GGGTTGGCGG GGCTAGTGGC
ACATATGCGC ATTTTGTTGC CACGACATTA AAGCCACAGA AATCTAATCA ATATCAATTT
GGAATAAAAG TATTGATTCC GAACGCTCCC TATCTTCATC ACGCCATATT TAGTGCAAAC
TATTATCATC TAAATGATCT AAACCAAATT ATCCCCATCC CAATCGCGAA TCAAAATTAT
AGACGTTTTG CATCAGGCTC ATCTGTGTTC CATGGCTTCA ATTTATATTT TCAAGATGAT
CCACAATATA ATATACACGT ATATGCAAAT GCCAGCTTCG AAAGTGCAAA TTACGCTAAT
TATGTGACTG GAGGTCAGAG TTATAATGGA TTGCCTATCT CAAATGTCCC TTGGGTGACA
TTCAATGGTG GTCTTTACTA TTCTTTTTTC AAATCAAATA TTCTATATCA GCCAAGGATT
TGGTACCAGT ACACCGGAAG TCAGGATATA TATAATAATA ATACTGGCCT GCCCACGCGA
AATAAGCTTG GCGGGTACGG CATTCTTAAT CTTGGAATGA AGGTTGCCTT GGCTACATCA
AAGGTAAAAT TTGTTCATGC CGTCGACTTT AATCTCGATC TTCTCAATGT TCTGAATAAT
AAATATAATT CTTTCGAATA TTATTCTGGC GGTGGCTACT ATGGTATTCC GGGTCAACTT
TTGGCTGAAC CTGGTGCGCC GTTTACTGCT TATGGAAGCT TAAATGTAAA ATTTCGGTGA
 
Protein sequence
MYNVMEPYIH RRHKKLMRPT SYKHIIFLLG TTAMATLPFS HTASAQTVSS GGGTVVNAGE 
VTASSGALNT LLKLPTKREI FNSTQSIKVV GKKQIKALGP AAGAAQALAV APGVSIEADG
TSGSPRAGIS INGMKTGWGN IAGNSNDGTV MVTFDGVPMV DPAYGVWQAS EIPNLSFIKG
LSVTYGPGYP INRWYDNIGG GLNFVPIEPT AKARADIGGY FGSYGARGTN FSFDTGEHDG
WSAVFAGTIG RSGNYLSGYG FNNPSNNYAY YAKIIKKFPG GRISIGGFAS RASAYRPVPI
PVSPNSQVTI NGDNPITGNS YPGPIYSQQT TGFYNTLPKS IYYKRIPIRT YLIYSKFFDK
LDSTTSFHNI LFYRYGERIH EHYDNYGQSN NVLIQYFNAH SQTFGDKAYF TFKLPYNTVS
LGGYAVYNKF NSFLDYYNPN NPAVYDSGPN AGQPVLINGI PVNYSLVVPH NYHNSYLYET
DLAAFAQDVI RPTKNIRLTP GLSVVSMHTD FVNNSLAAFP YNTTTGLDSF VGVNGDRRPN
SSTNFVEFEP SIGANYKINK NIALYANYST AYKGVGGASG TYAHFVATTL KPQKSNQYQF
GIKVLIPNAP YLHHAIFSAN YYHLNDLNQI IPIPIANQNY RRFASGSSVF HGFNLYFQDD
PQYNIHVYAN ASFESANYAN YVTGGQSYNG LPISNVPWVT FNGGLYYSFF KSNILYQPRI
WYQYTGSQDI YNNNTGLPTR NKLGGYGILN LGMKVALATS KVKFVHAVDF NLDLLNVLNN
KYNSFEYYSG GGYYGIPGQL LAEPGAPFTA YGSLNVKFR