Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_3609 |
Symbol | |
ID | 5159391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009471 |
Strand | + |
Start bp | 26128 |
End bp | 28587 |
Gene Length | 2460 bp |
Protein Length | 819 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640538911 |
Product | TonB-dependent receptor |
Protein accession | YP_001220344 |
Protein GI | 148244108 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 70 |
Plasmid unclonability p-value | 0.396824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAACG TCATGGAGCC CTACATTCAC AGACGTCACA AGAAACTTAT GAGACCAACG TCGTACAAAC ATATAATTTT TTTACTCGGA ACAACTGCTA TGGCGACGTT GCCTTTTAGC CATACTGCAT CCGCACAGAC TGTAAGTTCT GGAGGTGGTA CTGTTGTCAA TGCGGGCGAG GTAACCGCAT CCTCAGGGGC ATTGAATACG TTACTTAAAC TACCCACAAA AAGAGAGATA TTCAACTCGA CTCAATCAAT TAAAGTGGTA GGCAAAAAGC AGATCAAGGC ATTGGGGCCG GCTGCCGGTG CGGCTCAAGC GCTAGCAGTG GCGCCCGGAG TAAGCATTGA AGCTGATGGC ACGAGTGGTT CCCCGAGGGC GGGTATCAGT ATCAATGGCA TGAAAACAGG GTGGGGGAAT ATCGCCGGCA ATTCCAATGA TGGGACTGTC ATGGTTACTT TCGATGGTGT GCCAATGGTC GATCCGGCAT ACGGTGTCTG GCAGGCTTCA GAGATTCCTA ATCTTTCTTT TATCAAGGGC CTATCTGTCA CTTACGGTCC GGGATACCCT ATTAATCGCT GGTACGATAA CATCGGTGGT GGCCTAAATT TTGTACCGAT TGAACCAACG GCCAAGGCGC GGGCCGATAT CGGTGGTTAC TTCGGGTCAT ACGGCGCGCG TGGCACCAAT TTTTCTTTTG ATACTGGCGA ACACGACGGT TGGTCAGCCG TATTTGCCGG AACTATCGGC AGAAGTGGAA ATTATTTAAG TGGCTATGGA TTTAACAATC CATCAAATAA TTATGCGTAT TATGCAAAGA TAATCAAGAA ATTCCCTGGG GGTCGGATTA GTATTGGCGG ATTTGCATCC AGGGCTTCTG CCTACAGACC TGTTCCAATC CCAGTATCGC CAAATTCGCA GGTTACTATC AATGGCGACA ATCCTATAAC AGGGAATTCA TACCCAGGAC CAATTTATTC TCAGCAGACT ACAGGTTTTT ACAATACATT ACCTAAATCT ATATATTATA AAAGAATCCC AATAAGAACA TATCTCATAT ATTCAAAGTT TTTTGATAAA TTAGACTCAA CAACATCGTT TCATAACATT TTATTTTACA GATACGGAGA AAGAATACAC GAGCACTATG ATAACTATGG ACAGAGTAAC AATGTACTTA TACAATATTT CAATGCTCAC AGCCAAACAT TTGGTGATAA AGCCTATTTC ACATTTAAAT TACCATACAA TACGGTTTCA TTAGGCGGAT ATGCCGTATA TAATAAATTT AATTCATTCT TAGATTATTA TAATCCAAAC AATCCAGCTG TGTATGATTC GGGGCCGAAT GCAGGGCAGC CTGTTCTTAT TAACGGTATT CCAGTTAACT ATAGCCTTGT TGTTCCGCAT AATTATCACA ACTCGTATTT GTATGAGACC GATCTTGCTG CTTTTGCACA GGATGTGATT CGGCCGACTA AAAATATTAG GCTGACGCCT GGCTTGAGCG TTGTTTCAAT GCATACTGAT TTTGTTAATA ATTCACTTGC TGCTTTTCCA TATAATACTA CTACTGGACT AGATTCTTTT GTTGGTGTCA ATGGGGATCG TAGGCCTAAT TCGTCGACAA ACTTTGTTGA ATTTGAACCA TCTATAGGCG CGAACTATAA AATCAACAAA AATATTGCTC TTTATGCCAA CTATTCTACC GCTTATAAAG GGGTTGGCGG GGCTAGTGGC ACATATGCGC ATTTTGTTGC CACGACATTA AAGCCACAGA AATCTAATCA ATATCAATTT GGAATAAAAG TATTGATTCC GAACGCTCCC TATCTTCATC ACGCCATATT TAGTGCAAAC TATTATCATC TAAATGATCT AAACCAAATT ATCCCCATCC CAATCGCGAA TCAAAATTAT AGACGTTTTG CATCAGGCTC ATCTGTGTTC CATGGCTTCA ATTTATATTT TCAAGATGAT CCACAATATA ATATACACGT ATATGCAAAT GCCAGCTTCG AAAGTGCAAA TTACGCTAAT TATGTGACTG GAGGTCAGAG TTATAATGGA TTGCCTATCT CAAATGTCCC TTGGGTGACA TTCAATGGTG GTCTTTACTA TTCTTTTTTC AAATCAAATA TTCTATATCA GCCAAGGATT TGGTACCAGT ACACCGGAAG TCAGGATATA TATAATAATA ATACTGGCCT GCCCACGCGA AATAAGCTTG GCGGGTACGG CATTCTTAAT CTTGGAATGA AGGTTGCCTT GGCTACATCA AAGGTAAAAT TTGTTCATGC CGTCGACTTT AATCTCGATC TTCTCAATGT TCTGAATAAT AAATATAATT CTTTCGAATA TTATTCTGGC GGTGGCTACT ATGGTATTCC GGGTCAACTT TTGGCTGAAC CTGGTGCGCC GTTTACTGCT TATGGAAGCT TAAATGTAAA ATTTCGGTGA
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Protein sequence | MYNVMEPYIH RRHKKLMRPT SYKHIIFLLG TTAMATLPFS HTASAQTVSS GGGTVVNAGE VTASSGALNT LLKLPTKREI FNSTQSIKVV GKKQIKALGP AAGAAQALAV APGVSIEADG TSGSPRAGIS INGMKTGWGN IAGNSNDGTV MVTFDGVPMV DPAYGVWQAS EIPNLSFIKG LSVTYGPGYP INRWYDNIGG GLNFVPIEPT AKARADIGGY FGSYGARGTN FSFDTGEHDG WSAVFAGTIG RSGNYLSGYG FNNPSNNYAY YAKIIKKFPG GRISIGGFAS RASAYRPVPI PVSPNSQVTI NGDNPITGNS YPGPIYSQQT TGFYNTLPKS IYYKRIPIRT YLIYSKFFDK LDSTTSFHNI LFYRYGERIH EHYDNYGQSN NVLIQYFNAH SQTFGDKAYF TFKLPYNTVS LGGYAVYNKF NSFLDYYNPN NPAVYDSGPN AGQPVLINGI PVNYSLVVPH NYHNSYLYET DLAAFAQDVI RPTKNIRLTP GLSVVSMHTD FVNNSLAAFP YNTTTGLDSF VGVNGDRRPN SSTNFVEFEP SIGANYKINK NIALYANYST AYKGVGGASG TYAHFVATTL KPQKSNQYQF GIKVLIPNAP YLHHAIFSAN YYHLNDLNQI IPIPIANQNY RRFASGSSVF HGFNLYFQDD PQYNIHVYAN ASFESANYAN YVTGGQSYNG LPISNVPWVT FNGGLYYSFF KSNILYQPRI WYQYTGSQDI YNNNTGLPTR NKLGGYGILN LGMKVALATS KVKFVHAVDF NLDLLNVLNN KYNSFEYYSG GGYYGIPGQL LAEPGAPFTA YGSLNVKFR
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