| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_3595 |
|---|
| Symbol | |
|---|
| ID | 5159400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009471 |
|---|
| Strand | + |
|---|
| Start bp | 13772 |
|---|
| End bp | 14719 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640538900 |
|---|
| Product | transposase IS116/IS110/IS902 family protein |
|---|
| Protein accession | YP_001220333 |
|---|
| Protein GI | 148244097 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 119 |
|---|
| Plasmid unclonability p-value | 0.917263 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.896237 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCGG AATGCATGGC CGGCTTCATC GGAATACGCA GTCAGTTGCT GGCATTTTTT
GAGAAGCGTC CGCGATGCCT GATCGGCATG GAGGCTTGCG CAGGTGCTCA TGACTGGGGG
CGCAGGCTGC GGGAACTGGG GCATGACGTC CGGCTTATGC CTCCTTCTTA TGTGAAGCCT
TACGTGAAGC GCGGCAAGAC GGATGCCGCG GATGCAGCTG CGATCTGCGA GGCCGTGACA
CGTCCCTCCA TGCGGTTTGT CGCCATCAAG AGCGAAGCCT GTTCATCGGT TCTGGTGGTT
CACCGCACGC GGGACTTTCT GGTTCGTCAG CGCACGCAGA TCGGAAATGC GATCCGGGCC
CACATGACGG AGTTCGGCAT CGTAGCGGCG AAGGGCGCGC AGAATGTCGA TCGATTGAAG
GAACAACTGG ACCGGCTGCC GGAAGCTGCC CAGTTGCCTG TGAGCTTGCT CTTCGATCAG
TTGGCCGAGA CGGACAAGCG GATCGATCGG TTGACCGACG AGATCGAAGA AGCCTTCAAG
CAGAACGAGA CAAGCCAGCG TCTGGCTACG ATCCCAGGTG TTGGGATACT GTCGGCAACG
ATCATTGCCG CAACGACGCC GGATGTCGAC AATTTCGATT GCGCGAGAGA TTATGCCGCT
TGGCTTGGGC TGACACCCAA GCCGCACTCC ACCGGAGGCA AGCAGAAGGT GGGCCGGATC
TCGAAGATGG GCAACCGTTA CATCCGACGC CTGCTGTATC TGGGTGCCAT AGCGCAGATC
ATGCTCAGGT ACAGGCTCAA GCGCGAGCCG GGGGCGGACT GGCTGTCGAG CATGCTGATC
CGGAAGAAGA CGAAAGTTGC CGCCATCGCC TTGGCGCATC GCATGGCAAG AACGATCTTC
GCTGTCCTCA GGGACGGATC ACGCTATCGG CCACAGGCGA CTGCCTGA
|
|---|
| Protein sequence | MKSECMAGFI GIRSQLLAFF EKRPRCLIGM EACAGAHDWG RRLRELGHDV RLMPPSYVKP
YVKRGKTDAA DAAAICEAVT RPSMRFVAIK SEACSSVLVV HRTRDFLVRQ RTQIGNAIRA
HMTEFGIVAA KGAQNVDRLK EQLDRLPEAA QLPVSLLFDQ LAETDKRIDR LTDEIEEAFK
QNETSQRLAT IPGVGILSAT IIAATTPDVD NFDCARDYAA WLGLTPKPHS TGGKQKVGRI
SKMGNRYIRR LLYLGAIAQI MLRYRLKREP GADWLSSMLI RKKTKVAAIA LAHRMARTIF
AVLRDGSRYR PQATA
|
|---|
| |