Gene Acry_3582 details

Gene Information

• Locus tag: Acry_3582
• ID: 5159387
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009470
• Strand: -
• Start bp: 32323
• End bp: 32787
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640538888
• Product: DNA mismatch endonuclease vsr
• Protein accession: YP_001220321
• Protein GI: 148244084
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3727] DNA G:T-mismatch repair endonuclease
• TIGRFAM ID: [TIGR00632] DNA mismatch endonuclease Vsr

Plasmid Coverage information

• Num covering plasmid clones: 43
• Plasmid unclonability p-value: 0.684164
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCTGATA TTGTCGACCG GCAGACGCGC AGCCGGATGA TGGCGGGTAT CCGGTCGGCC 
AATACCCGAC CGGAGCGGAT GATCCGCAGT GCCCTCCATG TACGTGGCTT TCGTTACCGG 
CTGCATCCGC GTGCCCTGCC GGGCCGTCCC GACATCGTCC TGCCCCGCTA TCGCGCCGCT 
ATCTTCGTTC ATGGCTGCTT CTGGCATGGC CACGACTGCG GGCTGTTCCG GCTGCCCGGC 
ACCCGCCCGG AATTCTGGGC CGAGAAGATC CGGCGGAACC GGCAGAGAGA TGCCGCTGTC 
ATGAACGAGC TGGTCGCCAC TGGCTGGCGT GTCCTCACGA TCTGGGAATG TGCGATCAGG 
CGCAGGCGCG GCATGGTGCC GGAACCTGTC ATTGACGAAG CCGTCTCGTG GCTGAGATCC 
GGAGATGGAA ACCTGGAAAT TCGGGGGAAC AATGGCGCTG ACTGA 

 

Protein sequence

MPDIVDRQTR SRMMAGIRSA NTRPERMIRS ALHVRGFRYR LHPRALPGRP DIVLPRYRAA 
IFVHGCFWHG HDCGLFRLPG TRPEFWAEKI RRNRQRDAAV MNELVATGWR VLTIWECAIR 
RRRGMVPEPV IDEAVSWLRS GDGNLEIRGN NGAD