Gene Acry_3541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3541 
Symbol 
ID5159310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009469 
Strand
Start bp73588 
End bp75783 
Gene Length2196 bp 
Protein Length731 aa 
Translation table11 
GC content66% 
IMG OID640538850 
ProductRecD/TraA family helicase 
Protein accessionYP_001220283 
Protein GI148244045 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGAACC ATTTTATTGC CACTGCCCCT GCTCAGACAC CCGATCGCGA GGTCCTCGCT 
GGCCTGGTTG AGCGGGTGAC GTTCCACAAT GTCGAGAACG GCTTTTGCGT GTTGCGGGTG
AAAGCCCGGG GGCACCGTGA TCTCGTTACA GTCATCGGGC ATGCCGCGAC GATCAGCGCT
GGCGAGTGGC TGACGGCGAG CGGCGAGTGG GTGAACGACC GGGTTCATGG CCAGCAATTC
CGGGCGCGGT TCCTGCGGAC ATCGGCGCCG ACCACGGCCG AGGGGATCGA GCGCTATCTG
GCCTCGGGCA TGATCCGCGG CATCGGGCCG GTGTATGCGA AGAAACTGAT CCGAGCCTTC
GGCGAGACGG TGTTCGACGT GATCGAGGCA AAGCCCGAGC GCCTGCGCGA GGTGCCGGGT
ATCGGCGCGG TGCGGGCCGG GCGGATCGTC AATGCCTGGG CCGAGCAGAA GGTGGTGCGG
GAGATCATGG TGTTCCTGCA CAGCCATGGG GTGAGCACGG CCCGCGCCGT GCGGATCTTC
AAGACCTACG GCGCCGACGC GGTGCAGGTG ATGAGCGAGA ACCCGTATCG TCTGGCGCGG
GACATCAGGG GGATCGGTTT CCGGACAGCG GATGCGATCG CGGAGAAGCT TGGCATCGCC
AGGGACGCGA TGATCCGTGT GCGTGCTGGC ATCGGTCATG CGCTGGCGAC GGCAATGGAT
GATGGCCATT GTGGCCTACC GGCCGGCGAA CTGGTCTCGC TCGCCGAAAC GTTGCTCGAG
GTGCCGGCGC CGCTGATCGG GACGGCACTC GACCTCGAAC TGGCAGAGGG CACGGTGATC
GCCGATCAGG TGGCGGGGAC TGACTGTGTG TTCCTGGCCG GCTTGTATCG GGCGGAGCAG
GGTATCGCCG AACGGCTGCG GATTGTTGCC TCTGGTGCAA CGCCCTGGCC ATCGATCGAT
GCGGACAAGG CGATCGGCTG GGTGGAAAGC CATCTCGGCA TGAATCTGGC GACGAGCCAG
AGTGAGGCGG TGCGGCTGGC GCTGACCGCG AAGCTGTTGG TGATCACCGG CGGACCGGGT
GTCGGCAAGA CCACGATCGT CCGGGCGATC CTGCGGATCC TCGCTGCGAA ATCCGTCCGC
ATTCTGCTCG CCGCGCCGAC CGGCCGGGCA GCCAAGCGCC TTGCCGAGAC GACGGGGGGC
GAGGCGAAGA CGATCCACCG CCTGCTCGAG GTAGATCCTG CGAGCGGTAG TTTCCGCCGC
GGCGTCGACC ATCCTCTGGA ATGCGACCTT CTGGTGATCG ACGAGACCTC GATGGTGGAC
GTGCCGTTGA TGCATGCGCT GACCAGGGCG ATCCCCGACG AGGCAGCGCT GCTGGTGGTG
GGAGATGTCG ACCAGCTTCC CTCGGTGGGA CCGGGGCAGG TGCTCGCCGA TCTGATCGGG
TCTGGCGCGG TACCGGTGGT GCGGCTGACG GAGATCTTCC GCCAGGCATC GGCGAGCCGG
ATCATCACCG TGGCGCATAG CGTCAATCGC GGGGAGATCC CCGATCTCGG CCGCGCCGAT
CCCGAGAGCG ATTTCCATTT CGTGGCGGCC GACGAGCCGG AGACGGCGGT CGAGCGCATC
GTGGAGCTGG TGAAGACGCG GATTCCGCAC CGGTTTGGAC TGGATCCGAT CCGCGACATC
CAGGTGCTCT GTCCGATGGC CCGGGGTGGG GTCGGCGCGC GGTCACTCAA CATCACCCTG
CAGGCGGCGC TGAACGGCGC GGCGGAACCG CGGGTCGAGC GATTCGGCTG GACCTATGCT
CCCGGCGACA AGGTCATGCA GATCGAGAAC GACTACGACC GGGAGGTCTA CAACGGCGAT
ATCGGCTTTA TTGCCCGGGT CGATGCGGAG GCCGGGGAGG TTGGCGTCGG CTTCGATGGA
CGGGAGGTGG TCTACGGTCT CGGCGAGCTG GACGGGCTTG TGCCGGCCTA TGCGGCGACG
ATCCACAAGT CCCAGGGCTC GGAATACCCT GCCGTCGTCA TTCCGGTGCT GACCCAGCAC
TACGTGATGC TGCAGCGGAA CCTGCTCTAC ACCGGCATCA CGCGCGGCCG GCGGCTAGTC
GTTCTGGTCG GCAGTCGGCG TGCTGTCGCC ATCGCCGTGC GGAATGTCTC GGGGCGGCGC
CGATGGTCGA AGCTCAGAGA GTGGCTGTCA GGATGA
 
Protein sequence
MGNHFIATAP AQTPDREVLA GLVERVTFHN VENGFCVLRV KARGHRDLVT VIGHAATISA 
GEWLTASGEW VNDRVHGQQF RARFLRTSAP TTAEGIERYL ASGMIRGIGP VYAKKLIRAF
GETVFDVIEA KPERLREVPG IGAVRAGRIV NAWAEQKVVR EIMVFLHSHG VSTARAVRIF
KTYGADAVQV MSENPYRLAR DIRGIGFRTA DAIAEKLGIA RDAMIRVRAG IGHALATAMD
DGHCGLPAGE LVSLAETLLE VPAPLIGTAL DLELAEGTVI ADQVAGTDCV FLAGLYRAEQ
GIAERLRIVA SGATPWPSID ADKAIGWVES HLGMNLATSQ SEAVRLALTA KLLVITGGPG
VGKTTIVRAI LRILAAKSVR ILLAAPTGRA AKRLAETTGG EAKTIHRLLE VDPASGSFRR
GVDHPLECDL LVIDETSMVD VPLMHALTRA IPDEAALLVV GDVDQLPSVG PGQVLADLIG
SGAVPVVRLT EIFRQASASR IITVAHSVNR GEIPDLGRAD PESDFHFVAA DEPETAVERI
VELVKTRIPH RFGLDPIRDI QVLCPMARGG VGARSLNITL QAALNGAAEP RVERFGWTYA
PGDKVMQIEN DYDREVYNGD IGFIARVDAE AGEVGVGFDG REVVYGLGEL DGLVPAYAAT
IHKSQGSEYP AVVIPVLTQH YVMLQRNLLY TGITRGRRLV VLVGSRRAVA IAVRNVSGRR
RWSKLREWLS G