Gene Acry_3533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3533 
Symbol 
ID5159338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009469 
Strand
Start bp64386 
End bp65438 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content70% 
IMG OID640538842 
Productpyridoxal-5'-phosphate-dependent enzyme, beta subunit 
Protein accessionYP_001220275 
Protein GI148244037 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID[TIGR01747] diaminopropionate ammonia-lyase family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGG GCATGATTAT GGTTATGAAC GCAACAACCG AAACTCCCCG CACCTCCGGC 
ATTGCCTCGG ATCTCGCCCG CCTCTCGCCG GATTACGCGC CGACGCCGCT ACTCGAGCTG
CCTGCCTTGG CCAGAAGGCT GGGCGTCGCC CAGGTGCTGG CGAAAGACGA AGGGTGCCGC
ATGCTCGGCA GCTTCAAGTC GCTCGGTGGC ACCTATGCCG GGCTTCGCGC ACTGGCGCGT
GCTGCGAACA CGGACATCGC CGCGCTGATC GCCACACGTC CGGGCGGGCA GCCTACCCTG
GTCTGCGCCA GCGACGGCAA CCATGGCCTG GCGGTCGCGG CCGCAGCGCG CTTCGCCGGG
GCTAGCGCCC GCGTCTACCT GCACAGCAGC GTACCCCAAT CCCGTGCCAA GCGGATCGAG
GCGCAAGGCG CCGAGGTGAT CTGGGTCCAG GGCACCTACG ACGACGCGGT GCACGAAGCT
GCCGAGGCGG CCCGTAACGA GGTTGGGATT CTCGTGGCCG ACACCACGGA CGATCCGAAC
GACCCGGTGG TGCGCGACGT GATGGCGGGC TACGGCGTCA TGGCCGCCGA AATCCGCGCC
CAGGTGGAAG CCGCCGGTCA CGCGCGGCCC ACGCACCTGT TCGTCCAGGC TGGCGTCGGC
GGCCTCGCCG CCGTCATGGC CAAAGGCCTG GGCGACTGGC TTGCGGCACC GGGCCGGATC
ATCGTCGTCG AGCCCGAGAC TGCGCCCGCC GTGGCCGCCG CTCTTACCGC AGGCACGATC
ATCCGTGTCC AAGGTGACCT GGAGACGACC GCGGAAATGC TGTCCTGCGG CGAGGCCAGC
GCCCCCGCAC TCGAAACCCT GCGACGGCAC CGCGTGGAAG CGATCACCGT CTCTGAAGCC
ACCCTCGACG AGGCCCCGCT CCTCCTGCGC GACTGCGGCG GCCCAGCGAC GACGTCTTCC
GGCGCCGCAA GCCTGGCGGG CGCCCTCGCA CGGCCCGGCC TCCCGGCGGA TGCCAGGGTG
CTGATCCTCG TCACCGAAGG GGTGCCGGCA TGA
 
Protein sequence
MKTGMIMVMN ATTETPRTSG IASDLARLSP DYAPTPLLEL PALARRLGVA QVLAKDEGCR 
MLGSFKSLGG TYAGLRALAR AANTDIAALI ATRPGGQPTL VCASDGNHGL AVAAAARFAG
ASARVYLHSS VPQSRAKRIE AQGAEVIWVQ GTYDDAVHEA AEAARNEVGI LVADTTDDPN
DPVVRDVMAG YGVMAAEIRA QVEAAGHARP THLFVQAGVG GLAAVMAKGL GDWLAAPGRI
IVVEPETAPA VAAALTAGTI IRVQGDLETT AEMLSCGEAS APALETLRRH RVEAITVSEA
TLDEAPLLLR DCGGPATTSS GAASLAGALA RPGLPADARV LILVTEGVPA