Gene Acry_3527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3527 
Symbol 
ID5159292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009469 
Strand
Start bp58493 
End bp59383 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content62% 
IMG OID640538836 
Producttype IV secretion system protein VirB9 
Protein accessionYP_001220269 
Protein GI148244031 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02781] P-type conjugative transfer protein VirB9 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATGCG CGCGCAAACT CGCGGCCAGC GGGTTCCTCT GGCTCGGCAT GATGGGGACG 
GCCCTCGCCA TACAGTATCC CCATCCGGGG CACGAAGACC CCCGCGTTCG CTATGTGCCC
TATCAGTCCG GCAACGTCAC CGACATCTGG ACCGCGCCAG GCGCGGCGCT GACGGTCCAG
TTCGGCAGGA ATGAAAAGGT CGTCTCCGTC GCGGAAAGCG ATAGCGCCTA TCTCAAGGTC
GTCCCGGTCC AGAATTACCT TTTCATCAAG CCAACCGGCA TTCTGCCGGC ACAGCCGATC
GCGGTCCTCT GCAAGACCAG CGACGGCAAG CTCCGGCATT ACTTTTTCCA GTTCGAGACC
GTGAACAAGC ACCTCGGCGC CGGCGAGAAT GTCGATTACG CCGTGGTGTT CACCTATCCG
CACCAGGCGT ATGAGCGCCG GCTTGCCAAG CGGAAGGCGG CCGAAGCGAA GGCTGTCCAG
AAGGAGGCCA GGAGCCGCCT TGATGAAGCG CGCGCGGTCA TGAACGCGGC GACGGTCGAT
CAATATCAGG GGCCGCGCAA TTACGAATAT GTCGCTCGTG GCGATCATCA GCTGGCACCC
GCCGAGGTCT GGGACAACGG CTATTCAACC GTGTTCACCT TCCCGGCCAT GCAGCGCATC
CCGGCCATTT TCTACGTCCA GCCGGACGGC AAGGAGGCAA CGGCCAACTA TTCGGTCAAC
GGGAATACGG TCGTTGTGCC GGGCACCGCG CCAGAATGGC GGCTGCGCGA TGGGCATACG
GTCCTCGACA TTTATGACCT CAAATACAAC CCGACCGGCG CCACGCCAGG CACGCACACG
ATCAGCCCGG ATGTCGAGCG CGAGATGAGG ACATTCAACA ATGGCAAATG A
 
Protein sequence
MTCARKLAAS GFLWLGMMGT ALAIQYPHPG HEDPRVRYVP YQSGNVTDIW TAPGAALTVQ 
FGRNEKVVSV AESDSAYLKV VPVQNYLFIK PTGILPAQPI AVLCKTSDGK LRHYFFQFET
VNKHLGAGEN VDYAVVFTYP HQAYERRLAK RKAAEAKAVQ KEARSRLDEA RAVMNAATVD
QYQGPRNYEY VARGDHQLAP AEVWDNGYST VFTFPAMQRI PAIFYVQPDG KEATANYSVN
GNTVVVPGTA PEWRLRDGHT VLDIYDLKYN PTGATPGTHT ISPDVEREMR TFNNGK