Gene Acry_3524 details

Gene Information

• Locus tag: Acry_3524
• ID: 5159336
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009469
• Strand: +
• Start bp: 55741
• End bp: 56499
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640538833
• Product: type IV secretion system family protein
• Protein accession: YP_001220266
• Protein GI: 148244028

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCAAGC CCTCTCGCCG GCTCGGAATC GCCAGCGCGA TCGCCATCCT CGGCTTTGCT 
TCACCCACCT TGGCGCAAGT CCCGGTGATC GATAGCGCCT CATTGGCGCA AATTGTCAAC 
CAGCTAAATG AAGCCAAGCA GCAATATTCT GAACTCGTCA GCCAATATAA TGAGCTGAAA 
TCGACCTATA ACGCACTCTC GCAGAACGTG AATCCGAACC AATGGGCGCA ACAGCTCGAT 
CAATCGGCCA TGCAGGACAC GGTGCCCAAC ACCAGCATCT TGCCAAACAT GCTCGACGGG 
ATCAGTCCGC CCTCCTCGCT GAGCGGCAAT GTCGGCTCGC TCGCGCAACA ATATTACAAT 
ATGAACAAGG TCTATATCCC GGCCGGCTCG GATTTCGGTT CAAAGCAGAT CCAACAGGGC 
GCGAATGAGA CCGCGAATTT CGAGGCGATC GCCACGCAAA ATCTGCAATC GCTGGAAGCC 
CGCGAGCAAG AGCTGCCGCA GATTCAGAGC CAGCTGAACA GTGCCACGAC GATTCAGCAG 
GTCGCCTCAA TCCAGGCCCG CCTCTCCGCT GAACAGAACT ATGTCCAGGC CCAACAGGCC 
CAGGCGCAAA ACCTGCAACT ATTGGCGTTC GAGGAGAACC GCGCAGGCCA GGAAGCAGCC 
GCACAAGAAA ACGCACAGGG CGGCGAACAA ACGCTCTCAA CGCTGTGCGG CGATGCCCAA 
ACTCTCGGCG GGGAGCCTTC GGCATGTCAG GGACAATGA 

 

Protein sequence

MLKPSRRLGI ASAIAILGFA SPTLAQVPVI DSASLAQIVN QLNEAKQQYS ELVSQYNELK 
STYNALSQNV NPNQWAQQLD QSAMQDTVPN TSILPNMLDG ISPPSSLSGN VGSLAQQYYN 
MNKVYIPAGS DFGSKQIQQG ANETANFEAI ATQNLQSLEA REQELPQIQS QLNSATTIQQ 
VASIQARLSA EQNYVQAQQA QAQNLQLLAF EENRAGQEAA AQENAQGGEQ TLSTLCGDAQ 
TLGGEPSACQ GQ