Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_3524 |
Symbol | |
ID | 5159336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009469 |
Strand | + |
Start bp | 55741 |
End bp | 56499 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640538833 |
Product | type IV secretion system family protein |
Protein accession | YP_001220266 |
Protein GI | 148244028 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAAGC CCTCTCGCCG GCTCGGAATC GCCAGCGCGA TCGCCATCCT CGGCTTTGCT TCACCCACCT TGGCGCAAGT CCCGGTGATC GATAGCGCCT CATTGGCGCA AATTGTCAAC CAGCTAAATG AAGCCAAGCA GCAATATTCT GAACTCGTCA GCCAATATAA TGAGCTGAAA TCGACCTATA ACGCACTCTC GCAGAACGTG AATCCGAACC AATGGGCGCA ACAGCTCGAT CAATCGGCCA TGCAGGACAC GGTGCCCAAC ACCAGCATCT TGCCAAACAT GCTCGACGGG ATCAGTCCGC CCTCCTCGCT GAGCGGCAAT GTCGGCTCGC TCGCGCAACA ATATTACAAT ATGAACAAGG TCTATATCCC GGCCGGCTCG GATTTCGGTT CAAAGCAGAT CCAACAGGGC GCGAATGAGA CCGCGAATTT CGAGGCGATC GCCACGCAAA ATCTGCAATC GCTGGAAGCC CGCGAGCAAG AGCTGCCGCA GATTCAGAGC CAGCTGAACA GTGCCACGAC GATTCAGCAG GTCGCCTCAA TCCAGGCCCG CCTCTCCGCT GAACAGAACT ATGTCCAGGC CCAACAGGCC CAGGCGCAAA ACCTGCAACT ATTGGCGTTC GAGGAGAACC GCGCAGGCCA GGAAGCAGCC GCACAAGAAA ACGCACAGGG CGGCGAACAA ACGCTCTCAA CGCTGTGCGG CGATGCCCAA ACTCTCGGCG GGGAGCCTTC GGCATGTCAG GGACAATGA
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Protein sequence | MLKPSRRLGI ASAIAILGFA SPTLAQVPVI DSASLAQIVN QLNEAKQQYS ELVSQYNELK STYNALSQNV NPNQWAQQLD QSAMQDTVPN TSILPNMLDG ISPPSSLSGN VGSLAQQYYN MNKVYIPAGS DFGSKQIQQG ANETANFEAI ATQNLQSLEA REQELPQIQS QLNSATTIQQ VASIQARLSA EQNYVQAQQA QAQNLQLLAF EENRAGQEAA AQENAQGGEQ TLSTLCGDAQ TLGGEPSACQ GQ
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