Gene Acry_3520 details

Gene Information

• Locus tag: Acry_3520
• ID: 5159343
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009469
• Strand: +
• Start bp: 51980
• End bp: 52666
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640538829
• Product: lytic transglycosylase, catalytic
• Protein accession: YP_001220262
• Protein GI: 148244024

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 0.940795
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGATCA CCCCGGCCCA TTTCCTCGCT CTCGCGAATC GCTGCGCCCC CGAGGTCGCA 
CCGGGCACGC TGGCGGCGGT TGCCAGCACC GAGTCGGGGT TCAACACTTT GGCGATTCAG 
GACAACACCA CGCGCCAGAG CATGCGGCCA TCGGATGTGC GTAGCGCGAT AGCCGTAGCC 
AGACGGCTGA TTGCTGACGG GCATTCAGTT GATCTCGGCC TCATGCAGAT CGATAGCGCG 
AACCTCCCCC GCTTGGGCCT GACTGTCACC ACGGCCTTTG ATGCCTGTGC ATCGGTACGG 
GCGGGCGGCA AGCTACTGAC GCAGGACTAC AAGCGGCCGG ACGGGCAGGG CCGCCAGGCG 
GCGCTCCTAG CTGCGCTATC ACGCTACAAC ACGGGATCAG CCTGGCAGGG GTTCCAGAAC 
GGCTACGTCA GCCGCGTGGT TTCAACCGCC AAATATGTTG TGCCCGAAAT CGACCCCGCC 
GATAGCGTGC AAGCCCCCAA GGCCAGCCCG TCATCAGCCT CCTCTTCTCC GCACCCGCCT 
GCCTGGGATG TGTTCCCGAA CTCGATCGGT CCGGCTGGCT TCGCGTCGGC GCATGCGGTG 
ACGCTCCAAG CGTCCCGCGC TTCTGGCCCC AGCGGCCTCG CTCAACCCTC AAAACAGGAA 
ACTCGCGGTG AAACAAAGGC TCACTAA 

 

Protein sequence

MLITPAHFLA LANRCAPEVA PGTLAAVAST ESGFNTLAIQ DNTTRQSMRP SDVRSAIAVA 
RRLIADGHSV DLGLMQIDSA NLPRLGLTVT TAFDACASVR AGGKLLTQDY KRPDGQGRQA 
ALLAALSRYN TGSAWQGFQN GYVSRVVSTA KYVVPEIDPA DSVQAPKASP SSASSSPHPP 
AWDVFPNSIG PAGFASAHAV TLQASRASGP SGLAQPSKQE TRGETKAH