Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_3478 |
Symbol | |
ID | 5159340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009469 |
Strand | + |
Start bp | 7497 |
End bp | 8426 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640538790 |
Product | pyridoxal biosynthesis lyase PdxS |
Protein accession | YP_001220223 |
Protein GI | 148243985 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.180632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGATA TGCCGACTAA TCTTACCGAA ACATCACCGT TACGACTTAA GACGGGACTA GCCGAAATGC TCATGGGTGG GGTCATCATG GATGTCACTA CCGCAGAGCA GGCGAAGATC GCAGAGAATG CCGGTGCAGT GGCAGTGATG GCACTCGAGC GGGTCCCCGC ACAGATACGA GCCGAGGGTG GCGTCGCTAG AATGGCTTCC CCGAAAAAAA TCAAGGAGAT CATGACTGCC GTTTCGATCC CCGTGATGGC AAAATGCCGG ATCGGCCATT TCGCCGAAGC GCAGGTGCTT CAGGCTCTCG GCGTAGATTT CATCGATGAG TCGGAAGTTC TGAGCCCGGC TGATGAAATG CATCATATCA ACAAGCACGC TTTCGTATCT CCTTTCGTCT GTGGGGCACG TAACCTGGGC GAGGCACTGC GGCGGATTGC CGAAGGAGCC GCAATGATAA GGACAAAAGG GGAGGCCGGT ACCGGCGATG TGATGCACGC AGTCCGGCAC GTCCGACAAA TCACCAAGGA TATTCACGCC TTAACGATTC TACGCGAGGA TGAACTGTAT GCCGCCGCAA AGGAATTGGC GGCTCCCTAC GAGTTGGTAA GAATCGTCGC CAGTATCGGC CGACTGCCCG TGCCAAACTT CGCGGCCGGC GGCATTGCAA CCCCTGCTGA CGCGGCGCTC GTCCGTCATC TAGGGGCAGA AGCAGTTTTC GTAGGCTCTG GTATCTTCAT GAGAGACTCA CAGAATTTTG TCGATCCTAG CGAGGCACAA TCACGCGCAG AAGCAATAGT CCAGGCAACA ACGCATTACG ACAACCCCCA GATCCTTGCC GAGATCAGCG AATCATGCCT CGGAGCCATA CACGGCCTTG CTGCGGCTAG TTTGAAAGAA GAAGTGTTGC TCCAGACTCG AGGCTGGTAG
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Protein sequence | MSDMPTNLTE TSPLRLKTGL AEMLMGGVIM DVTTAEQAKI AENAGAVAVM ALERVPAQIR AEGGVARMAS PKKIKEIMTA VSIPVMAKCR IGHFAEAQVL QALGVDFIDE SEVLSPADEM HHINKHAFVS PFVCGARNLG EALRRIAEGA AMIRTKGEAG TGDVMHAVRH VRQITKDIHA LTILREDELY AAAKELAAPY ELVRIVASIG RLPVPNFAAG GIATPADAAL VRHLGAEAVF VGSGIFMRDS QNFVDPSEAQ SRAEAIVQAT THYDNPQILA EISESCLGAI HGLAAASLKE EVLLQTRGW
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