Gene Acry_3421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3421 
Symbol 
ID5159217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009468 
Strand
Start bp136476 
End bp137726 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content63% 
IMG OID640538737 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_001220170 
Protein GI148243931 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAACG GCAAAGCCGC GAATGCCACC GGACCACTTG CGGGCCTCAG GGTGCTTGAT 
CTGTCGCATG TAATGGCTGG TCCGGTCTGC GGCATGATGT TGGCGGACAT GGGCGCCGAG
GTAATCAAGG TCGAAAAAGT CCCGGGTGGC GACGATACCA GGCGGGCAGT TCCGCCCTCA
GTCGCCGGCG AGTCTGCGGC GTTCATGATG ATGAATCGCA ACAAGAGGGG TATAGCGCTC
AATCTTAAAT CGCCGCTGGG GCGAGACGCT CTGCTCCGCC TGATCGATTC GAGCGATATT
CTGATCGAGA ACTATCGCAA AGGCGCGCTC GATCGCATGG GATTCGGTTA TGAAGCGATG
CATGCGCGCA ATCGCGGGTT GATCTATTGC AGCATCTCTG GCTTTGGCCG CACCGGGCCA
TATGCTGAAC GTGGTGGGTT CGACCTGATC GCCCAGGGAA TGAGTGGCGT GATGAGCGTT
ACCGGCGAAG GGCCGGGGCG AGCGCCAGTG AAGGTTGGGC CGCCGATTGC CGACATCGGC
GCCGGGATGC TCGCGGCGAT GGGAATTCTT GCGGCACTCA ATTACCGGAA CCAGACCGGC
GAGGGGCAGA TGGTGGACAC CTCGCTGCTC GAGGCAGGGA TCACCTATCT CTACTGGCAT
GCAGCGATCA GCTTCGCCAC CGGTTCCTCG CCCGGTCCAC TTGGTTCCGG TCATCCGCTT
ATGGCGCCCT ACCAGGCTTT TCGTACCAGC GACGATCCGA TCACCGTCGG TGCAGCCAAT
GAAGGCAACT GGAGGAGGCT GTTGGCGGTG TTGCAGGCCG ACGATCTCGC AGCCGATCCG
CGCTTCACGA CGAATGCCGG ACGAATGGAG AATCTGTCGG AGTTAGAGGC GAGACTGGAG
GCAATCTTCC GGCAGAAGAC ATCCGCCGAA TGGCTGGTGG CGCTCGACAA GGCGGGGGTT
CCAGCCGGCC CGGTACTGAC CGTCCAGCAG ATGGCCGAGG ACCCGCAGGT GAAGGCACGC
AGCATGATCG TCGAAACGGA GCACGCGGTG GCCGGCCGCA CGCGCGCCCT CGGGCTGCCG
GTTAAGTTCT CGACGACGCC GGCCAATGTG CGCCGTCCGG CACCGGCTTA CGGTCAGCAT
ACGCGCGAGG TCCTGCGCGA GGCAGGATTC TCCGAAGTCG AAATCGACGG AATGATCGAT
TCGGGCGCCG CGCAGGCGGC AATGCCCGAG CGCAAGGAGG CCGCCGAATG A
 
Protein sequence
MTNGKAANAT GPLAGLRVLD LSHVMAGPVC GMMLADMGAE VIKVEKVPGG DDTRRAVPPS 
VAGESAAFMM MNRNKRGIAL NLKSPLGRDA LLRLIDSSDI LIENYRKGAL DRMGFGYEAM
HARNRGLIYC SISGFGRTGP YAERGGFDLI AQGMSGVMSV TGEGPGRAPV KVGPPIADIG
AGMLAAMGIL AALNYRNQTG EGQMVDTSLL EAGITYLYWH AAISFATGSS PGPLGSGHPL
MAPYQAFRTS DDPITVGAAN EGNWRRLLAV LQADDLAADP RFTTNAGRME NLSELEARLE
AIFRQKTSAE WLVALDKAGV PAGPVLTVQQ MAEDPQVKAR SMIVETEHAV AGRTRALGLP
VKFSTTPANV RRPAPAYGQH TREVLREAGF SEVEIDGMID SGAAQAAMPE RKEAAE