Gene Acry_3418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3418 
Symbol 
ID5159192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009468 
Strand
Start bp133352 
End bp134554 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content63% 
IMG OID640538734 
ProductSerine--glyoxylate transaminase 
Protein accessionYP_001220167 
Protein GI148243928 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATACCG GCCGGCACTT CCTTCAGATC CCTGGCCCGA CCAATGTTCC GGACCGGGTG 
CTTCGGGCGA TCGACATGCC GACCATCGAT CACCGAGGCC CCGAATTCGG CCGTCTTGGC
CTCGAGGTCA TCGAGGGGTG CAAGGCTGTG TTCCGGACCG GCAATCCTGT GATCATCTAT
CCCTCGTCGG GGACCGGCGC CTGGGAGGCG GCGATCCTGA ACACGCTCTC TCCGGGCGAC
CGAGTGCTGG TGGCCGAGAC GGGACACTTC GCGACGCTCT GGGGCAGGAT GGCTGCAAAA
CTGAAGCTCG AGGTCGAAAC TATACCGGGT GACTGGCGGC ACGGCGCCGA CCCTGGAGAG
ATCGGCGCCA GACTGGCGGA AGACCGTGGG CATGTGATCA AGGCAGTAAT GGTGGTGCAC
AACGAGACCT CTACCGGCGT CACCAGCCGC ATTCCGGACA TCCGCCGGGC GATTGACGCG
GCTCGCCATC CGGCGTTGTT CCTAGTCGAC ACCATCTCCT CCCTTGGTTC GATCGACTAC
CGGCACGACG AATGGGGTGT CGATGTTACA GTGGGAGGCT CGCAGAAGGG GCTGATGCTA
CCGCCGGGTC TCGGTTTCAA CGCCGTCTCA GACAAGGCGC TCGCCGCAGC GCGGGGCAAC
TCGAGCCGGC GTTCCTACTG GGACTGGCAC GAGATCATCG CTGCCAACGC TGACGGCTAC
TGGCCCTACA CCCCAGCCAC CAACCTGCTA TACGGCCTGC GCGAGTCGCT GGCCATGCTG
CAGGAGGAGG GAATGGACTC TGTCTTCGCG CGTCATGATA GGCATGCGGC GGCGACGCGG
GCAGCGATAA GGGCCTGGGA ACTGGAGATC CTTTGCGTCG ATCCGTATGC GTATTCCAGC
GCACTGACAG CGGTTGTCAT GCCCGAAGGC CATGACGCGG ACCGCTATCG TGAGGTCGTT
CTCAACAAGT TCGACATGTC CCTAGGCACC GGCCTCGCCA AGCTGAAAGG CTGCGTGTTC
CGGATTGGGC ACCTAGGTCA TTTCAACGAT CTGATGTTGA TGGGGACGTT GGCCGGGGTG
GAGATGGGAT TCGCTCTCGC AGGTGTGCCG TACCGGAAGG GCGGCGTGGG CGCGGCGATG
GCGGTACTGG AACACACGGT ACCGCCTGGC AAGCATCACA TGAAGGACGA GGACGCCGCC
TGA
 
Protein sequence
MHTGRHFLQI PGPTNVPDRV LRAIDMPTID HRGPEFGRLG LEVIEGCKAV FRTGNPVIIY 
PSSGTGAWEA AILNTLSPGD RVLVAETGHF ATLWGRMAAK LKLEVETIPG DWRHGADPGE
IGARLAEDRG HVIKAVMVVH NETSTGVTSR IPDIRRAIDA ARHPALFLVD TISSLGSIDY
RHDEWGVDVT VGGSQKGLML PPGLGFNAVS DKALAAARGN SSRRSYWDWH EIIAANADGY
WPYTPATNLL YGLRESLAML QEEGMDSVFA RHDRHAAATR AAIRAWELEI LCVDPYAYSS
ALTAVVMPEG HDADRYREVV LNKFDMSLGT GLAKLKGCVF RIGHLGHFND LMLMGTLAGV
EMGFALAGVP YRKGGVGAAM AVLEHTVPPG KHHMKDEDAA