Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_3402 |
Symbol | |
ID | 5159174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009468 |
Strand | - |
Start bp | 120451 |
End bp | 121296 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640538718 |
Product | AraC protein, arabinose-binding/dimerisation |
Protein accession | YP_001220151 |
Protein GI | 148243912 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCTA TGTCTGACCG CATTTGTCTG ACCCATGACA CCGCGAGCGG GATCGAAGCC GTCCACGCAC GATTCATGGC GCATGCCTAT GACCTTCACC GCCACGATGA CTGGTTAGTC GGCGTCACCG AGAGCGGTGT TCAGGATTTC ATCTGCCGTG GCGCCCGCCG GCGCAGCACA CCGGGGCGTG TCATTCTGAT CGAGCCGCAG GAAGCCCATG ACGGACAAGC GGGGGACGCC AGCGGGTTCG CCTACTCTAT GATCTATCTG CCGCGTTCAT GGTTGCGGGC CGGCCTGATG GATGCGTACG GCGGCGATCC GGGCTTCGCC GCCAGTCTCT GTGACGACCC GCTCCTCGCC CATTCCATCC GTGCCGCCTG CGGTGTGTTG TTCCATTCGA GCGAGCGCCT CATACGAGAC GCGGCCCTCG ACGCCGTGCT GGACCGCCTG CGTCCGCATC TCGGTCGTCC AAGGCGAGAC GCCCCTGGCG GCGGTGCCGC ACGTGTAGCG CGTCTAGCAC GGGAGCTGCT GCACGACACA ATGGCAAGGG ATATCGGCGC CAATAGTCTG GCCAAGGCAG CAGGCGCGGC TAGTCGCTTC CAGCTTGCCC GGGCATTCCG AGCAGCTTAC GGTACTTCAC CGCATTCCTA TCTCATGCAA ATTCGCCTGC TGCGCGCCCG TCAGCTCCTG GCGACCGGGA TGCGCCCCGC CACCGTGGCG GTGGAGTGCG GTTTCGCCGA TCAGAGTCAC CTGGGCCGCC GATTCCGTCG TGCGTACGGC CTTACGCCCG CGGCGTATCG CGCCCTCTGC ACGAATGTTC CAGACTGCAA AGCCAAAGTC GGGTGA
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Protein sequence | MNSMSDRICL THDTASGIEA VHARFMAHAY DLHRHDDWLV GVTESGVQDF ICRGARRRST PGRVILIEPQ EAHDGQAGDA SGFAYSMIYL PRSWLRAGLM DAYGGDPGFA ASLCDDPLLA HSIRAACGVL FHSSERLIRD AALDAVLDRL RPHLGRPRRD APGGGAARVA RLARELLHDT MARDIGANSL AKAAGAASRF QLARAFRAAY GTSPHSYLMQ IRLLRARQLL ATGMRPATVA VECGFADQSH LGRRFRRAYG LTPAAYRALC TNVPDCKAKV G
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