Gene Acry_3402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3402 
Symbol 
ID5159174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009468 
Strand
Start bp120451 
End bp121296 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content65% 
IMG OID640538718 
ProductAraC protein, arabinose-binding/dimerisation 
Protein accessionYP_001220151 
Protein GI148243912 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCTA TGTCTGACCG CATTTGTCTG ACCCATGACA CCGCGAGCGG GATCGAAGCC 
GTCCACGCAC GATTCATGGC GCATGCCTAT GACCTTCACC GCCACGATGA CTGGTTAGTC
GGCGTCACCG AGAGCGGTGT TCAGGATTTC ATCTGCCGTG GCGCCCGCCG GCGCAGCACA
CCGGGGCGTG TCATTCTGAT CGAGCCGCAG GAAGCCCATG ACGGACAAGC GGGGGACGCC
AGCGGGTTCG CCTACTCTAT GATCTATCTG CCGCGTTCAT GGTTGCGGGC CGGCCTGATG
GATGCGTACG GCGGCGATCC GGGCTTCGCC GCCAGTCTCT GTGACGACCC GCTCCTCGCC
CATTCCATCC GTGCCGCCTG CGGTGTGTTG TTCCATTCGA GCGAGCGCCT CATACGAGAC
GCGGCCCTCG ACGCCGTGCT GGACCGCCTG CGTCCGCATC TCGGTCGTCC AAGGCGAGAC
GCCCCTGGCG GCGGTGCCGC ACGTGTAGCG CGTCTAGCAC GGGAGCTGCT GCACGACACA
ATGGCAAGGG ATATCGGCGC CAATAGTCTG GCCAAGGCAG CAGGCGCGGC TAGTCGCTTC
CAGCTTGCCC GGGCATTCCG AGCAGCTTAC GGTACTTCAC CGCATTCCTA TCTCATGCAA
ATTCGCCTGC TGCGCGCCCG TCAGCTCCTG GCGACCGGGA TGCGCCCCGC CACCGTGGCG
GTGGAGTGCG GTTTCGCCGA TCAGAGTCAC CTGGGCCGCC GATTCCGTCG TGCGTACGGC
CTTACGCCCG CGGCGTATCG CGCCCTCTGC ACGAATGTTC CAGACTGCAA AGCCAAAGTC
GGGTGA
 
Protein sequence
MNSMSDRICL THDTASGIEA VHARFMAHAY DLHRHDDWLV GVTESGVQDF ICRGARRRST 
PGRVILIEPQ EAHDGQAGDA SGFAYSMIYL PRSWLRAGLM DAYGGDPGFA ASLCDDPLLA
HSIRAACGVL FHSSERLIRD AALDAVLDRL RPHLGRPRRD APGGGAARVA RLARELLHDT
MARDIGANSL AKAAGAASRF QLARAFRAAY GTSPHSYLMQ IRLLRARQLL ATGMRPATVA
VECGFADQSH LGRRFRRAYG LTPAAYRALC TNVPDCKAKV G