| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_3379 |
|---|
| Symbol | |
|---|
| ID | 5159263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009468 |
|---|
| Strand | + |
|---|
| Start bp | 94823 |
|---|
| End bp | 96502 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640538698 |
|---|
| Product | transposase, IS4 family protein |
|---|
| Protein accession | YP_001220131 |
|---|
| Protein GI | 148243892 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5421] Transposase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTTCC GCATCAAACC ATCAGGTGGC CGTCGCTACC TGCAGATCGT CGAGAACAAG
CGGGTCGATG GCAAGGTCCG CCAGGTTGTG CGGCTGACCA TCGGCCGGAT GGACGAACTC
GAAGCAAGCG GCCAGCTCGC GAGGCTCCTC ACCTCCGGCG CCCGCCATTG CGAGCAGATG
ATGCTGCTCT CCGCCATCGA GAATGAGGCG ACCACGCTGA GCATGCGCCG GTTCGGCGCG
CCATTGCTGT TCGGCCGACT GTGGCAGGAG AGCGGGATCG CTGCGGTGTT CGAGGAGCTG
CTGGCCGGGC GGCAGTTCGA GTTCCCGGTC GAGCGCGCGG TGTTCGCCAC CGTGCTCCAC
CGGATCATGG TCTCGGGCTC GGATCGCGCC TGCGACAAAT GGCTCGAGGA TTACGACATT
CCCGGCACCG AGGAGCTCGG CCTGCATCAC CTCTACCGCG CCATGGCCTG GCTCGGCGAA
GAGCTGCCGG ACGAGGAACA GGGGGATGCC ACGCCCTTTG CACCGCGGAC GGTGAAGGAT
CTGGTGGAAG AGCGGCTCTT CGCCCGACAG CATGATCTGT TCACCGACCT CTCGGTCGTG
TTCATGGACA CCACCTCGCT GTATTTCGAA GGTGCCGACG GCGAGACGCT GGGCGCGCGG
GGCCACTCCA AGGATTACCG CCCACAGCTC GCGCAGATGA TCCTGGGCGT GGTGATCGAT
CAGGACGGCC GGCCGATCTG CACCGAGATG TGGCCGGGCA ACACCGCCGA TGTCTCGGTA
CTGGTGCCGG TGATCGACCG CCTGCGGTCG CGCTTCGGCA TCACCCGGGT CTGCGTTGTC
GCCGATCGCG GCATGATCAG CGCCGCGACG ATCGCCGCGC TGGAGGAGCG CGGACTGGAA
TACGTCCTCG GCGCAAGGGA ACGCACCGAC CGCATCGTCC GCGAGGTGGT GCTGGCCGAT
GAGCGCCCCT ACATCCCGCT CTGCCTCGAG CGCGCCGGTG GCGACGAGAC CCAGCTCTTC
ATCAAGGAGG TCAAAGTCGC GGGCAAGCAT TACATCGTCT GCCGCAACGA GGCGGTGGCC
ATCGAAGAGG CCGAGACCAG GCGCCAGGTG GTCGCCGCCC TCGATCGTCA GCTGACGCGA
GGCGACAAGG CGCTGATCGG CAACTCCGCC TATCGCCGCT TCCTGCGCCC AGTCAGCGAC
GCAAAGCCCG GCCGCAAGAG CAAGCTGTTC GAGATCGACG CCGGCAAGCT CGCCGAGGAA
GCCCGCTTCG ACGGCGTCTT CGTGCTGCGC TCCAATGCCA GGATCTCGCC GCTGCAGGCG
GTGCTCCGCT ACCGGGACCT GCAGAATGTC GAACAGCTGT TCCGTGTGGC GAAGGCGACG
ATGCGCACCC GGCCAATCTA CCATTCCTCC GCCGCCGCCA TCCGCGGCCA TGTGTTCTGT
TCTTTTCTCG CGCTGATCCT GCACCAGGCG CTCGACGAAA AACTCCGCCG GGCCGGCAAG
CGCGTCGAAT GGGCCGATCT CCTTCGTGAT CTCGACAGAC TGCAGCACGG CGAAATCAGT
CAGAACGGCA AGCGCTGGCA GCTGCGCACC GAAGCCGGCG TTGCGGCGGC CACAGCCTTC
AAAGCCGCCC GCATCGCCCT GCCGCCCCGT CTGCAGACCC CCCAGCAAGC CGTAACCTGA
|
|---|
| Protein sequence | MFFRIKPSGG RRYLQIVENK RVDGKVRQVV RLTIGRMDEL EASGQLARLL TSGARHCEQM
MLLSAIENEA TTLSMRRFGA PLLFGRLWQE SGIAAVFEEL LAGRQFEFPV ERAVFATVLH
RIMVSGSDRA CDKWLEDYDI PGTEELGLHH LYRAMAWLGE ELPDEEQGDA TPFAPRTVKD
LVEERLFARQ HDLFTDLSVV FMDTTSLYFE GADGETLGAR GHSKDYRPQL AQMILGVVID
QDGRPICTEM WPGNTADVSV LVPVIDRLRS RFGITRVCVV ADRGMISAAT IAALEERGLE
YVLGARERTD RIVREVVLAD ERPYIPLCLE RAGGDETQLF IKEVKVAGKH YIVCRNEAVA
IEEAETRRQV VAALDRQLTR GDKALIGNSA YRRFLRPVSD AKPGRKSKLF EIDAGKLAEE
ARFDGVFVLR SNARISPLQA VLRYRDLQNV EQLFRVAKAT MRTRPIYHSS AAAIRGHVFC
SFLALILHQA LDEKLRRAGK RVEWADLLRD LDRLQHGEIS QNGKRWQLRT EAGVAAATAF
KAARIALPPR LQTPQQAVT
|
|---|
| |