| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_3372 |
|---|
| Symbol | |
|---|
| ID | 5159198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009468 |
|---|
| Strand | + |
|---|
| Start bp | 88134 |
|---|
| End bp | 89282 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640538692 |
|---|
| Product | HipA domain-containing protein |
|---|
| Protein accession | YP_001220125 |
|---|
| Protein GI | 148243886 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
|---|
| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACC ACACGCCGGT TTTCTATGAG ACCCTGCTGG TTGGTATGAT CCATACGGAC
ACCAGGGGCT CTTGCTTCAC CTATGACGAG AGCTGGCTGT CACGGACAGG CAGCTTCCAG
ATCTCACTCA CCATGCCGCT TGGCCGCCCA GCGGTGGAGC ACCATGTCAT CATGCCATGG
CTGGCAAACC TGCTGCCAGA AGGCGATGCC ATCAGTACGA TCGCGAGGCG GTCCGGAATA
GCCACCGGCG ATATTCTCAG CCTCCTCATG GTCGTCGGCA GGGACACCGC GGGCGCGTTG
AGCATTGGTC AGCCTCGCAG CCGCGAGGGG CGCCATTATA TGACGATCGC CGGTCAGGAC
GCGCTGGAGC GGCTCATCGA AGATTTACCG CGCCGGCCGT TGCTGTCGGG AGATGACGGC
GTCTCGATGA GCCTGCCCGG CGCGCAGGAG AAATTGCCCG TCGTTCTCAA TGACAACGAT
ATTGCGCTTC CGCTAAACGG GGCGCCGTCA ACCCACATCA TCAAGCCCAA CAACCGAAGA
CTGCCAGGCA GCGTTCAGAA CGAGGCACTC TGCATGGTTC TGGCACGACG GGTTGGGCTC
GATGTGGCCG ACGTCACCAC CGGCCAGGCC GGCAAGCGCT CCTATCTTCT GGTTGAGCGC
TATGACCGGA TCCAGCGTGG CGGCGTGTGG CGCCGGCTAC ACCAGGAAGA TTTCTGCCAG
GCACTGTCGC TACCTCCGGC GTCGAAGTAC CAGCACAACA GAACGGGTAT CCTTGGGCCA
GGACTGGCCG ACCTCTTCCG GACCGTCAGG ACTTTCATGA CGGCGCGCGA TACGATCAGG
CTTCTCGATG CGGTTATCTT CAACGTGCTG ATCACGAACG TCGATTCCCA TGCGAAGAAC
TATTCGATCA TGTTGACTGG GCGTGCCCGG CTCTCGCCAC TTTACGATCT GATGGCCGGC
GATGCGTGGT CCGAGGTTAC CCAGAATCTC CCTCAGGACA TCGGCGGCAA GAACCGCGGC
CAATACATCA ATCATTTGCA CTGGCGTCGG ATGGCGGAGG AATCAGGTCT CAGCGCCGGC
GCCGTTGTCC GGCGGGTGAT CCAGATGGCA ACGGCCCTTC CATCCATGCT CGATCAGGCG
GTTGATTAG
|
|---|
| Protein sequence | MSDHTPVFYE TLLVGMIHTD TRGSCFTYDE SWLSRTGSFQ ISLTMPLGRP AVEHHVIMPW
LANLLPEGDA ISTIARRSGI ATGDILSLLM VVGRDTAGAL SIGQPRSREG RHYMTIAGQD
ALERLIEDLP RRPLLSGDDG VSMSLPGAQE KLPVVLNDND IALPLNGAPS THIIKPNNRR
LPGSVQNEAL CMVLARRVGL DVADVTTGQA GKRSYLLVER YDRIQRGGVW RRLHQEDFCQ
ALSLPPASKY QHNRTGILGP GLADLFRTVR TFMTARDTIR LLDAVIFNVL ITNVDSHAKN
YSIMLTGRAR LSPLYDLMAG DAWSEVTQNL PQDIGGKNRG QYINHLHWRR MAEESGLSAG
AVVRRVIQMA TALPSMLDQA VD
|
|---|
| |