Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_3320 |
Symbol | |
ID | 5159150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009468 |
Strand | + |
Start bp | 33797 |
End bp | 34759 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640538641 |
Product | CRISPR-associated Cas1 family protein |
Protein accession | YP_001220074 |
Protein GI | 148243835 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 [TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.118981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTGATC AGGCGCCGGG TCTGCCGCCG CCGCGACCCA TTCCAATTCG TGAACGCTCA TCTATCCTGT TTCTCGAGCG CGGACAGCTT GACGTAATCG ATGGGAGCTT TGTTGTCGTC GACCAGCGTG GCATTCGGAC CGTAATTCCG GTCGGCGGCA TTACATGCCT GATGCTGGAG CCAGGCACAC GTGTAAGCCA TGCCGCTGTT TGCCTAGCTG CACGAGCGGG CACATTACTC ATCTGGGTTG GAGAGGCTGG TGTGCGCCTC TACGCTGCCG GCCAGCCGGG TGGTGCGCGG TCCGACCGGC TACTCTATCA GGCACGACTT GCGCTCGATG ATGAGGCTCG TCTCCGTGTC GTACGAAGAA TGTATTCTAT CCGTTTTCAG GAGGAGCCGC CTCAACGCCG CTCTGTCGAT CAACTGCGCG GCATTGAGGG CGTCCGCGTG CGGGAGCTCT ATAAGCTGAT GGCCCAGCGC CATGGCGTCT CCTGGGCCGG GCGGCGTTAC GACCCCCAGA ACTGGGGTGG TGCTGATCTT GTCAATCGTT GTCTATCTGC TGCGACAGCT GCCCTATACG GGATCTCGGA GGCGGCAATC CTGGCCGCCG GGTATGCGCC GGCGATCGGC TTTTTACATA GTGGCAAGCC GCAAAGCTTT GTTTATGACA TTGCGGATCT CTTCAAGTTC GAAACGGTCG TGCCGGAGGC ATTCAAGGTA GTGGCGGCAG TGCAATCTGG ACGTGGACAG ATTGATGGGA TGGCGATCGG AGAACCTGTC GGCGCGGTCC GGCGGCGCTG CCGCGATGCG TTCCGCCGCA CAAATGTACT CGCACGCATC ATTCCCGCTA TCGAGGATGT GTTGGCAGCC GGCGGCTTGG CAGTGCCAGA GGCGCCCGAA GAAGCGATGC CCGTTGCTAT ACCACCACCG GAACCGACGG GTGATGCTGG TCATCGTGGT TGA
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Protein sequence | MSDQAPGLPP PRPIPIRERS SILFLERGQL DVIDGSFVVV DQRGIRTVIP VGGITCLMLE PGTRVSHAAV CLAARAGTLL IWVGEAGVRL YAAGQPGGAR SDRLLYQARL ALDDEARLRV VRRMYSIRFQ EEPPQRRSVD QLRGIEGVRV RELYKLMAQR HGVSWAGRRY DPQNWGGADL VNRCLSAATA ALYGISEAAI LAAGYAPAIG FLHSGKPQSF VYDIADLFKF ETVVPEAFKV VAAVQSGRGQ IDGMAIGEPV GAVRRRCRDA FRRTNVLARI IPAIEDVLAA GGLAVPEAPE EAMPVAIPPP EPTGDAGHRG
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