Gene Acry_3309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3309 
Symbol 
ID5159245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009468 
Strand
Start bp22010 
End bp23197 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content61% 
IMG OID640538630 
Productmajor facilitator transporter 
Protein accessionYP_001220063 
Protein GI148243824 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTAT CAGGTGTCAG AAATCAGACC GGAAGCCAGA CAGGCCGGGC CTGGATGGGA 
ATTTTCTCGG GTTTCTGCGC GAGCCTCGTA GGTATTGGCA TGGCGCGGTT CGCTTATACG
CCCTTGCTAC CCGCCATTAT CGGGGCACAC TGGTTCCAGC CTTCAGCCGC GGCATACCTA
GGAGCAGCCA ATCTCGCTGG CTATCTGGCG GGGGCGCTGG CCGGGCGGCC ACTTGCGACG
CGAATGACCG CCCCCTCGGC ACTTAGAACC ATGATGTTTC TGGCGACATC ATCCTTCTTC
GCCTGTGCCT ATCCGCTGGG CTTTTCGTGG TTCTTCGTCT GGCGCTTTTG CGCAGGTCTT
GCAGGTGGTG TGCTGATGGT TCTGGCAGCG CCCACCGTAT TGCCGCATTT GCCATCGTCC
CGTCGCGGCC TTGCCGGCGG TGTTATCTTC ATGGGTGTTG GAGTGGGAAT CGCTGCGTCC
GGCACGTTCG TGCCGTTACT ATTGAACCAA GGGCTGCAAC GGAGCTGGGT AGGGCTTGGT
GCTATCTCCC TGTTGCTGAC GCTGGCTTCC TGGGTCGGTT GGCCAGCTGA GGAAATAGTG
CCGCGAAGCA AGCCTCATAA AATCCCCGGC ACCGTTGCCT TGCGGGCGCT CTACGTCGAA
TACGCGCTCA ACGCCGTTGG GTTGGTGCCG CATATGCTGT TCTTGGTAGA TTTCGTTGCG
CGCGGGTTGG GGAATGGCAT ACGCACAGGA GCGGAATACT GGGTGCTTTT CGGCCTGGGT
GCCGTGGTCG GGCCGATCCT CAGCGGGCAC TTGGCTGATC GGCTGGGGTT TGCGCGCTTT
CTGCGGGTAT CTTATCTCGT GGAAGCCGCC GCCGTACTAC TGCCAGCCCT AGGTGGAGGG
GCGGCTTGGC TAATGCTTTC CAGCGCCGTC GTTGGCGCGT TCACGCCGGG TATCGTGCCG
CTGGTGCTGG GGCGCGTGCA TGAACTGCTC GCTCATCATC CGGCCGGGCA AAATGCCGCT
TGGAGCAAAG CTACTGTGAG CTTTGCCACA TTTCAGGCAG CGGCGGCCTA TGGCCTCTCG
TATATCTTCG CGCAGACGGG TGACTACCGG CAGCTTTTCA TCATCGGCGC CGTTGCCATG
TTGCTGGCTT TCGCTATCGA TGTGCTCGCA GGGGGCAAGA TACAATGA
 
Protein sequence
MDVSGVRNQT GSQTGRAWMG IFSGFCASLV GIGMARFAYT PLLPAIIGAH WFQPSAAAYL 
GAANLAGYLA GALAGRPLAT RMTAPSALRT MMFLATSSFF ACAYPLGFSW FFVWRFCAGL
AGGVLMVLAA PTVLPHLPSS RRGLAGGVIF MGVGVGIAAS GTFVPLLLNQ GLQRSWVGLG
AISLLLTLAS WVGWPAEEIV PRSKPHKIPG TVALRALYVE YALNAVGLVP HMLFLVDFVA
RGLGNGIRTG AEYWVLFGLG AVVGPILSGH LADRLGFARF LRVSYLVEAA AVLLPALGGG
AAWLMLSSAV VGAFTPGIVP LVLGRVHELL AHHPAGQNAA WSKATVSFAT FQAAAAYGLS
YIFAQTGDYR QLFIIGAVAM LLAFAIDVLA GGKIQ