Gene Acry_3273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3273 
Symbol 
ID5158939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009467 
Strand
Start bp182886 
End bp185081 
Gene Length2196 bp 
Protein Length731 aa 
Translation table11 
GC content66% 
IMG OID640538597 
ProductRecD/TraA family helicase 
Protein accessionYP_001220030 
Protein GI148243790 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGCC GCCCCGCAGA CACTGCCCCT GCCCAAGCAC CGGATCGCGA GGTCCTCGCC 
GGCCTGGTTG AGCGGGTGAC GTTCCACAAT GCCGAGAACG GTTTCTGCGT GTTGCGGGTG
AAAGCCCGGG GGCACCGTGA TCTCGTTACA GTCATCGGGC ATGCCGCGAC GATCAGCGCC
GGAGAGTGGC TGACCGCGAG CGGTGAATGG GTAAACGACC GGGTTCATGG CCAGCAATTC
CGGTCGAAGT TCCTGCGGAC ATCGGCGCCG ACCACGGCCG AGGGGATCGA GCGCTATCTG
GCCTCTGGCA TGATCCGCGG CATTGGGCCG GTGTATGCGA AGAAACTGAT CCGGGCCTTC
GGTGACACGG TGTTCGACGT GATCGAGGCC AAGCCCGAAC GCCTGCGCGA GGTGCCGGGT
ATCGGTGCGG TGCGGGCCGG GCGGATCGTC AACGCCTGGG CCGAGCAGAA GGTTGTGCGG
GAGATCATGG TGTTCCTGCA TAGCCATGGG GTGAGCACGG CCCGCGCCGT GTGGATCTTC
AAGACCTACG GCGCTGACGC CGTGCAGGTG ATGAGCGAGA ACCCGTATCG TCTGGCGCGG
GATATCAGGG GGATCGGTTT CCGGACAGCG GATGCGATCG CGGAGAAGCT CGGCATCGCC
AGGGACGCGA TGATCCGGGT GCGTGCCGGC ATCGGACATG CTCTGGCGAC GGCAATGGAT
GATGGCCATT GTGGCTTGCC GGCCGGCGAA CTGGTCTCGC TCGCCGAAAC GCTGCTCGAG
GTGCCGGCGC CGCTGATCGG GACGGCACTC GACCTCGAAC TGGCAGAGGG CACGGTGATC
GCCGATCAGG TGGCGGGGAC TGACTGTGTG TTCCTGGCCG GCTTGTATCG GGCGGAACAG
GGTATCGCCG AGCGGCTGCG AATTATTGCC TCCGGTGCAA CATCCTGGCC ATCGATCGAT
GCCGACAAGG CGATCGGCTG GGTGGAAAGC CATCTCGGCA TGAATCTGGC GGCGAGCCAG
AGTGAGGCGG TGCGGCTGGC GCTGACCGCA AAGCTGCTGG TGATCACCGG CGGACCGGGT
GTCGGCAAGA CCACGATCGT CCGGGCGATC CTGCGGATCC TCGCTGCAAA ATCCGTCCGC
ATTCTGCTCG CCGCGCCGAC CGGCCGGGCA GCCAAGCGTC TTGCCGAGAC GACGGGGTTC
GAGGCGAAGA CGATCCACCG CCTGCTCGAG GTAGATCCTG CGAGCGGCGG CTTCCGCCGC
GGCGTCGACC ATTCGCTGGA ATGCGACCTG CTGGTGATCG ACGAGACCTC GATGGTGGAC
GTGCCGTTGA TGCATGCGCT GACCAGGGCG ATCCCCGACG AGGCAGCGCT GCTGGTGGTG
GGAGATGTCG ACCAGCTTCC CTCGGTGGGA CCGGGGCAGG TGCTCGCGGA CCTGATCGGG
TCTGGCGCGG TACCGGTGGT GCGGCTGACG GAGATCTTCC GCCAGGCAGC GGCAAGCCGG
ATCATAACTG TGGCGCATAG CGTCAATCGC GGGGAGATCC CCGATCTCGG CCGCGCCGAT
CCCGAGAGCG ATTTCCATTT CGTGGCGGCC GACGAGCCGG AGACGGCGGT CGAGCGCATC
GTGGAGTTGG TGAAGACGCG GATTCCGCGC CGGTTTAGAC TGGATCCGAT CCGCGATATC
CAGGTGCTCT GTCCTATGGC CCGGGGTGGG GTCGGCGCGC GGTCACTCAA CATCACCCTG
CAGGCGGCGC TGAACGGCGC GGCGGAACCG CGGGTCGAGC GATTCGGCTG GACCTACGCC
CCCGGCGACA AAGTCATGCA GATCGAGAAC GACTACGACC GGGAGGTCTA CAACGGCGAT
ATCGGCTTTA TTGCTCGGGT CGATGCGGAG GCTGGTGAGA TCGCTGTCGG CTTCGATGGA
CGGGAGGTGG TCTACGGTCT CGGCGAGCTG GACGCGCTTG TGCCGGCCTA TGCGGCGACG
ATCCACAAGT CCCAGGGCTC TGAATACCCA GCCGTCGTCA TTCCGGTGCT GACCCAGCAC
TACGTGATGC TGCAGCGGAA CCTGCTCTAC ACCGGCATCA CGCGCGGCCG GCGGCTAGTC
GTTCTGGTCG GCAGTCGGCG TGCTGTCGCC ATCGCCGTGC GGAATATCTC GGGGCGGCGC
CGATGGTCGA AGCTTAGGGA ATGGCTGGGG CAGTAG
 
Protein sequence
MASRPADTAP AQAPDREVLA GLVERVTFHN AENGFCVLRV KARGHRDLVT VIGHAATISA 
GEWLTASGEW VNDRVHGQQF RSKFLRTSAP TTAEGIERYL ASGMIRGIGP VYAKKLIRAF
GDTVFDVIEA KPERLREVPG IGAVRAGRIV NAWAEQKVVR EIMVFLHSHG VSTARAVWIF
KTYGADAVQV MSENPYRLAR DIRGIGFRTA DAIAEKLGIA RDAMIRVRAG IGHALATAMD
DGHCGLPAGE LVSLAETLLE VPAPLIGTAL DLELAEGTVI ADQVAGTDCV FLAGLYRAEQ
GIAERLRIIA SGATSWPSID ADKAIGWVES HLGMNLAASQ SEAVRLALTA KLLVITGGPG
VGKTTIVRAI LRILAAKSVR ILLAAPTGRA AKRLAETTGF EAKTIHRLLE VDPASGGFRR
GVDHSLECDL LVIDETSMVD VPLMHALTRA IPDEAALLVV GDVDQLPSVG PGQVLADLIG
SGAVPVVRLT EIFRQAAASR IITVAHSVNR GEIPDLGRAD PESDFHFVAA DEPETAVERI
VELVKTRIPR RFRLDPIRDI QVLCPMARGG VGARSLNITL QAALNGAAEP RVERFGWTYA
PGDKVMQIEN DYDREVYNGD IGFIARVDAE AGEIAVGFDG REVVYGLGEL DALVPAYAAT
IHKSQGSEYP AVVIPVLTQH YVMLQRNLLY TGITRGRRLV VLVGSRRAVA IAVRNISGRR
RWSKLREWLG Q