Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_3259 |
Symbol | |
ID | 5159053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009467 |
Strand | + |
Start bp | 171369 |
End bp | 172604 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640538583 |
Product | major facilitator transporter |
Protein accession | YP_001220016 |
Protein GI | 148243776 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.363352 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAAACG CCTCGGCTCA TATCCGCGGC ATCGCGGCCA ATCGCTGCCA GTTTACCCTA CAGGCGCTAC AGGTCTTCTT CGTCGGTCTT GTCATCGGCA TGGAGCGCGC GGTCCTGCCG ACCCTCGCGC ACGAGTTCGG CGTCGCTCCA GGTGCCTTTC TCTTTCTCGC GAGTTTCGTG CTCTCCTTCG GCCTGGTGAA GGGCGCGCTC AACCTTGTCG CCGGCGGGCT CGCCGACCGG TTCGGCCGCA AGCCTGTCCT CATTGCCGGC TGGATCGCAG CCATTCCCAT CCCGCTACTG ATCTGGGCGG CACCCAACTG GTGGTGGATC GTGATCGCGA ACGTGTTTCT CGGGATCAGC CAGGGCTTCA CCTGGACAAT GACGGTGACC AGCCAGATTG ACCTCGCCGG CAGTCACCAG CGCGGGCTTG CCGTCGGCAT CAACGAGGCT ACTGGATATG TGGCCGTCGG CATCGCCGGT GCTTGTGCTG CCTTGCTGGC CGAGGCGGTC GGCGCGCGCG ATGCCCTGAT GATTTTCGGC ATGGCCACGA TTGGTCTGGC CTTCGCCACG ATCACCCGTG TGCGCGACAC GCTTGCCTGG GTAAAGGCCG AACATGCCGA GGCCGATGCT GGCGCATCGC AGGATCATAC GCTCACGCTC CGCGCGATCT TCGTCCGGAT CTCCTTTCGC GATCGGGTTG GGCGGGCGAT CTGCCAGGGC GGGGTCGTCA ACAAGATCGC CGACACGCTG GTCTGGGTGA TGTTCCCGCT GTGCTTCAAG GCACATGGCG CCAAGCTGAT CGAAATCGGC TGGCTGACCG GCACCTACGC CACGGTCTGG GGCGTCTCAC AGCTCTGGAC TGGCCACTTG GGTGACCGGG TCGGCAGGCG GACGCCGGTG ATCGCCGGGT TTTTCCTCCT TGCCGCCGGC ATCGCAATCA CGGCGGCCGG GCGCGATGTT TCGCTCTGGT TGCCGGGAGC GATCGTCATG GGCATCGGAA TGGCGCTGCT CTACCCGAAC TTGATCGCAG CAATGTCCGA CCAAGCGGCG CCACTGATCC GCGGCAAGGC TCTCGGGACC TACCGTTACT GGCGCGACAC CGGCTACGCA CTCAGCGCCC TGTTACTCGG GCTTATCGCC CAATTCGCCC AGGCAACCCT CCCGACGCTC TGGATTACGG CGATCCTCGT GGCCGCATCC GGCGGCTGGC TCATGCGGGA TCTCTCTCGG AAATAA
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Protein sequence | MTNASAHIRG IAANRCQFTL QALQVFFVGL VIGMERAVLP TLAHEFGVAP GAFLFLASFV LSFGLVKGAL NLVAGGLADR FGRKPVLIAG WIAAIPIPLL IWAAPNWWWI VIANVFLGIS QGFTWTMTVT SQIDLAGSHQ RGLAVGINEA TGYVAVGIAG ACAALLAEAV GARDALMIFG MATIGLAFAT ITRVRDTLAW VKAEHAEADA GASQDHTLTL RAIFVRISFR DRVGRAICQG GVVNKIADTL VWVMFPLCFK AHGAKLIEIG WLTGTYATVW GVSQLWTGHL GDRVGRRTPV IAGFFLLAAG IAITAAGRDV SLWLPGAIVM GIGMALLYPN LIAAMSDQAA PLIRGKALGT YRYWRDTGYA LSALLLGLIA QFAQATLPTL WITAILVAAS GGWLMRDLSR K
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