Gene Acry_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3259 
Symbol 
ID5159053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009467 
Strand
Start bp171369 
End bp172604 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content65% 
IMG OID640538583 
Productmajor facilitator transporter 
Protein accessionYP_001220016 
Protein GI148243776 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.363352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAAACG CCTCGGCTCA TATCCGCGGC ATCGCGGCCA ATCGCTGCCA GTTTACCCTA 
CAGGCGCTAC AGGTCTTCTT CGTCGGTCTT GTCATCGGCA TGGAGCGCGC GGTCCTGCCG
ACCCTCGCGC ACGAGTTCGG CGTCGCTCCA GGTGCCTTTC TCTTTCTCGC GAGTTTCGTG
CTCTCCTTCG GCCTGGTGAA GGGCGCGCTC AACCTTGTCG CCGGCGGGCT CGCCGACCGG
TTCGGCCGCA AGCCTGTCCT CATTGCCGGC TGGATCGCAG CCATTCCCAT CCCGCTACTG
ATCTGGGCGG CACCCAACTG GTGGTGGATC GTGATCGCGA ACGTGTTTCT CGGGATCAGC
CAGGGCTTCA CCTGGACAAT GACGGTGACC AGCCAGATTG ACCTCGCCGG CAGTCACCAG
CGCGGGCTTG CCGTCGGCAT CAACGAGGCT ACTGGATATG TGGCCGTCGG CATCGCCGGT
GCTTGTGCTG CCTTGCTGGC CGAGGCGGTC GGCGCGCGCG ATGCCCTGAT GATTTTCGGC
ATGGCCACGA TTGGTCTGGC CTTCGCCACG ATCACCCGTG TGCGCGACAC GCTTGCCTGG
GTAAAGGCCG AACATGCCGA GGCCGATGCT GGCGCATCGC AGGATCATAC GCTCACGCTC
CGCGCGATCT TCGTCCGGAT CTCCTTTCGC GATCGGGTTG GGCGGGCGAT CTGCCAGGGC
GGGGTCGTCA ACAAGATCGC CGACACGCTG GTCTGGGTGA TGTTCCCGCT GTGCTTCAAG
GCACATGGCG CCAAGCTGAT CGAAATCGGC TGGCTGACCG GCACCTACGC CACGGTCTGG
GGCGTCTCAC AGCTCTGGAC TGGCCACTTG GGTGACCGGG TCGGCAGGCG GACGCCGGTG
ATCGCCGGGT TTTTCCTCCT TGCCGCCGGC ATCGCAATCA CGGCGGCCGG GCGCGATGTT
TCGCTCTGGT TGCCGGGAGC GATCGTCATG GGCATCGGAA TGGCGCTGCT CTACCCGAAC
TTGATCGCAG CAATGTCCGA CCAAGCGGCG CCACTGATCC GCGGCAAGGC TCTCGGGACC
TACCGTTACT GGCGCGACAC CGGCTACGCA CTCAGCGCCC TGTTACTCGG GCTTATCGCC
CAATTCGCCC AGGCAACCCT CCCGACGCTC TGGATTACGG CGATCCTCGT GGCCGCATCC
GGCGGCTGGC TCATGCGGGA TCTCTCTCGG AAATAA
 
Protein sequence
MTNASAHIRG IAANRCQFTL QALQVFFVGL VIGMERAVLP TLAHEFGVAP GAFLFLASFV 
LSFGLVKGAL NLVAGGLADR FGRKPVLIAG WIAAIPIPLL IWAAPNWWWI VIANVFLGIS
QGFTWTMTVT SQIDLAGSHQ RGLAVGINEA TGYVAVGIAG ACAALLAEAV GARDALMIFG
MATIGLAFAT ITRVRDTLAW VKAEHAEADA GASQDHTLTL RAIFVRISFR DRVGRAICQG
GVVNKIADTL VWVMFPLCFK AHGAKLIEIG WLTGTYATVW GVSQLWTGHL GDRVGRRTPV
IAGFFLLAAG IAITAAGRDV SLWLPGAIVM GIGMALLYPN LIAAMSDQAA PLIRGKALGT
YRYWRDTGYA LSALLLGLIA QFAQATLPTL WITAILVAAS GGWLMRDLSR K