Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_3252 |
Symbol | |
ID | 5159060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009467 |
Strand | + |
Start bp | 163559 |
End bp | 165421 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640538578 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001220011 |
Protein GI | 148243771 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCAGG CCGAAACGCT CGATCGCGCC GCGGTCGAGG CCCTGTGCGA GGCGATGTGT GGCGTTGTCT CCGGCGACCT GTCGGTGCGG CTGCGGACGG CGAGCGCGGA CCTGACGGTC CAGAAGCTGT CGCTGCTCGC GAATTTCATG CTGGAGACCG CCCAGCGCGC GGTGGAGCGC AGCCTGGCCT ATGCCGGGGC ACTCGACAAC GTGCAGCGCA TCGCACGGCT TTCGGCCTGG CAACTGGTGT TGCCTGACCA AGAGGTCGTG CCGGTCGGCA CCGCGGCGGG CCTGCCGGAT GCGGCGGCCG CGCCGCTGCA GGGGACCGCT TGGTTCCTCG ACCGCGTGGG CCCGGGCTGT CGTGCCGCGA TGGCCGCCCT GTTCCAGGGC GATGGCGGGA CGCTCGAATG GCTGGCGGCG GATGGCGAGG CCTGGTTCCG CACCGAGGTC GCCGCCTTGC GCGACGAGGG CAGGCTCGCG GGGTATCTCG TGATCACCCA GGACATCTCC GAGCGCCGGC GGGCGACCGA GCGCATCCGC TATCTCGCCG AGCACGACCC GCTGACCGGG CTCGCCAACC GGAGACGGCT GCACGAGCAA CTCGAAGGGG AACTCGAGGC CGGCCGCCGG CAGGGTACGA AATTCGCGGT CCATGTCATC GATGTCGACC GATTCAAGAC GGTGAACGAC CTGTTCGGCC ATGCCGCGGG CGACCGGCTG CTGGTCGATC TCGCCACCTG CCTGCGGCAG GAAGCGCGGG AAAGCGACAT GATCGCCCGC ATCGGCGGCG ACGAATTCGT CGTCCTGCAA GTCGGGATCG GCGACGCGCG GGACGCCGGG GCGCTGGCCG GGCGGCTGGT CGGGGCGGTG AGCGCGCGGC TCGCCGAGCC CGGCGCGCGC GCGCTGGCGG CGACGGTCTC GATCGGCATC GCGCTGGCGC CAGATGACGG CACGACCGCC GAGGCCCTGC TCTCGCATGC CGACATGGCG CTCTACCAGG TGAAGTCGAC CGGACGGAAC GGCTTCGCCT TCTTCAACAC CGAGATCAAC GAGGCCCAGC TCGCCCGTCG GCGGATGGAG GCGGAACTGC GCGGCGCCTG CGAGCGAGGC GAAATGGCGG TGCACTACCA GCCACTGTTC GAGATCGCGT CCGACCGGGT CGTCGGGTTC GAGGCGCTGG TACGCTGGCG GCGGGACGGC GAGGACGTCT CGCCGGCCGT GTTCATCCCG ATCGCCGAGG AGTCGGGCAG CATCATCGAG ATCGGCCGCT TCGTGCTGCG CGAGGCGTGC CGCGAGGCAG CGGGCTGGCC GGTAAAGTTG CGCGTCGCCG TCAATATCTC GGCGCTGCAG ATCCAGGACG GCGGGCTGCC CGATCTTGTC GCCACCGTGC TGGAGGAGAC CGGTCTGGAG GCCGGGCGGC TCGAACTCGA GGTGACCGAG TCGCTGCTGC TCGCCAATGC CGAGGCGGCG ACCGAGGTGC TCGCGCGGAT CAGGGCGCTG GGGGTGACGA TCTCGCTCGA CGATTTCGGC ACCGGCTATT CCTCGCTGGC GACGCTGCGG ATGTTCCCCT TCGACAAGAT CAAGCTCGAC CGCTCCTTCG TCAATGATCT CGGGCGGCTC GGCGAGGCGG AGGCGATCGT GATGGCGGTG CTCGGGCTCG GCCGCGCGCT CGACGTCTCG GTGGTCGCGG AGGGGGTGGA AACTGAGGAA CAGGCCGCCA TGCTGCGCGC GGCAGGATGC TCGCTGCTGC AGGGCTACCT GATCGGCCGA CCGGCACCGA TCGCCCGGTT CAGCGCGGAG GTCGGCCGCG ACGTTACGAG CAGGATGACG AAAACACCGA TACCTGCGGA TTCGCCTGGT TAG
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Protein sequence | MDQAETLDRA AVEALCEAMC GVVSGDLSVR LRTASADLTV QKLSLLANFM LETAQRAVER SLAYAGALDN VQRIARLSAW QLVLPDQEVV PVGTAAGLPD AAAAPLQGTA WFLDRVGPGC RAAMAALFQG DGGTLEWLAA DGEAWFRTEV AALRDEGRLA GYLVITQDIS ERRRATERIR YLAEHDPLTG LANRRRLHEQ LEGELEAGRR QGTKFAVHVI DVDRFKTVND LFGHAAGDRL LVDLATCLRQ EARESDMIAR IGGDEFVVLQ VGIGDARDAG ALAGRLVGAV SARLAEPGAR ALAATVSIGI ALAPDDGTTA EALLSHADMA LYQVKSTGRN GFAFFNTEIN EAQLARRRME AELRGACERG EMAVHYQPLF EIASDRVVGF EALVRWRRDG EDVSPAVFIP IAEESGSIIE IGRFVLREAC REAAGWPVKL RVAVNISALQ IQDGGLPDLV ATVLEETGLE AGRLELEVTE SLLLANAEAA TEVLARIRAL GVTISLDDFG TGYSSLATLR MFPFDKIKLD RSFVNDLGRL GEAEAIVMAV LGLGRALDVS VVAEGVETEE QAAMLRAAGC SLLQGYLIGR PAPIARFSAE VGRDVTSRMT KTPIPADSPG
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