Gene Acry_3252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3252 
Symbol 
ID5159060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009467 
Strand
Start bp163559 
End bp165421 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content70% 
IMG OID640538578 
Productdiguanylate cyclase/phosphodiesterase 
Protein accessionYP_001220011 
Protein GI148243771 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAGG CCGAAACGCT CGATCGCGCC GCGGTCGAGG CCCTGTGCGA GGCGATGTGT 
GGCGTTGTCT CCGGCGACCT GTCGGTGCGG CTGCGGACGG CGAGCGCGGA CCTGACGGTC
CAGAAGCTGT CGCTGCTCGC GAATTTCATG CTGGAGACCG CCCAGCGCGC GGTGGAGCGC
AGCCTGGCCT ATGCCGGGGC ACTCGACAAC GTGCAGCGCA TCGCACGGCT TTCGGCCTGG
CAACTGGTGT TGCCTGACCA AGAGGTCGTG CCGGTCGGCA CCGCGGCGGG CCTGCCGGAT
GCGGCGGCCG CGCCGCTGCA GGGGACCGCT TGGTTCCTCG ACCGCGTGGG CCCGGGCTGT
CGTGCCGCGA TGGCCGCCCT GTTCCAGGGC GATGGCGGGA CGCTCGAATG GCTGGCGGCG
GATGGCGAGG CCTGGTTCCG CACCGAGGTC GCCGCCTTGC GCGACGAGGG CAGGCTCGCG
GGGTATCTCG TGATCACCCA GGACATCTCC GAGCGCCGGC GGGCGACCGA GCGCATCCGC
TATCTCGCCG AGCACGACCC GCTGACCGGG CTCGCCAACC GGAGACGGCT GCACGAGCAA
CTCGAAGGGG AACTCGAGGC CGGCCGCCGG CAGGGTACGA AATTCGCGGT CCATGTCATC
GATGTCGACC GATTCAAGAC GGTGAACGAC CTGTTCGGCC ATGCCGCGGG CGACCGGCTG
CTGGTCGATC TCGCCACCTG CCTGCGGCAG GAAGCGCGGG AAAGCGACAT GATCGCCCGC
ATCGGCGGCG ACGAATTCGT CGTCCTGCAA GTCGGGATCG GCGACGCGCG GGACGCCGGG
GCGCTGGCCG GGCGGCTGGT CGGGGCGGTG AGCGCGCGGC TCGCCGAGCC CGGCGCGCGC
GCGCTGGCGG CGACGGTCTC GATCGGCATC GCGCTGGCGC CAGATGACGG CACGACCGCC
GAGGCCCTGC TCTCGCATGC CGACATGGCG CTCTACCAGG TGAAGTCGAC CGGACGGAAC
GGCTTCGCCT TCTTCAACAC CGAGATCAAC GAGGCCCAGC TCGCCCGTCG GCGGATGGAG
GCGGAACTGC GCGGCGCCTG CGAGCGAGGC GAAATGGCGG TGCACTACCA GCCACTGTTC
GAGATCGCGT CCGACCGGGT CGTCGGGTTC GAGGCGCTGG TACGCTGGCG GCGGGACGGC
GAGGACGTCT CGCCGGCCGT GTTCATCCCG ATCGCCGAGG AGTCGGGCAG CATCATCGAG
ATCGGCCGCT TCGTGCTGCG CGAGGCGTGC CGCGAGGCAG CGGGCTGGCC GGTAAAGTTG
CGCGTCGCCG TCAATATCTC GGCGCTGCAG ATCCAGGACG GCGGGCTGCC CGATCTTGTC
GCCACCGTGC TGGAGGAGAC CGGTCTGGAG GCCGGGCGGC TCGAACTCGA GGTGACCGAG
TCGCTGCTGC TCGCCAATGC CGAGGCGGCG ACCGAGGTGC TCGCGCGGAT CAGGGCGCTG
GGGGTGACGA TCTCGCTCGA CGATTTCGGC ACCGGCTATT CCTCGCTGGC GACGCTGCGG
ATGTTCCCCT TCGACAAGAT CAAGCTCGAC CGCTCCTTCG TCAATGATCT CGGGCGGCTC
GGCGAGGCGG AGGCGATCGT GATGGCGGTG CTCGGGCTCG GCCGCGCGCT CGACGTCTCG
GTGGTCGCGG AGGGGGTGGA AACTGAGGAA CAGGCCGCCA TGCTGCGCGC GGCAGGATGC
TCGCTGCTGC AGGGCTACCT GATCGGCCGA CCGGCACCGA TCGCCCGGTT CAGCGCGGAG
GTCGGCCGCG ACGTTACGAG CAGGATGACG AAAACACCGA TACCTGCGGA TTCGCCTGGT
TAG
 
Protein sequence
MDQAETLDRA AVEALCEAMC GVVSGDLSVR LRTASADLTV QKLSLLANFM LETAQRAVER 
SLAYAGALDN VQRIARLSAW QLVLPDQEVV PVGTAAGLPD AAAAPLQGTA WFLDRVGPGC
RAAMAALFQG DGGTLEWLAA DGEAWFRTEV AALRDEGRLA GYLVITQDIS ERRRATERIR
YLAEHDPLTG LANRRRLHEQ LEGELEAGRR QGTKFAVHVI DVDRFKTVND LFGHAAGDRL
LVDLATCLRQ EARESDMIAR IGGDEFVVLQ VGIGDARDAG ALAGRLVGAV SARLAEPGAR
ALAATVSIGI ALAPDDGTTA EALLSHADMA LYQVKSTGRN GFAFFNTEIN EAQLARRRME
AELRGACERG EMAVHYQPLF EIASDRVVGF EALVRWRRDG EDVSPAVFIP IAEESGSIIE
IGRFVLREAC REAAGWPVKL RVAVNISALQ IQDGGLPDLV ATVLEETGLE AGRLELEVTE
SLLLANAEAA TEVLARIRAL GVTISLDDFG TGYSSLATLR MFPFDKIKLD RSFVNDLGRL
GEAEAIVMAV LGLGRALDVS VVAEGVETEE QAAMLRAAGC SLLQGYLIGR PAPIARFSAE
VGRDVTSRMT KTPIPADSPG