Gene Acry_3135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3135 
Symbol 
ID5159081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009467 
Strand
Start bp32235 
End bp33797 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content59% 
IMG OID640538471 
Productglucose-methanol-choline oxidoreductase 
Protein accessionYP_001219904 
Protein GI148243664 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAGC ATTACGACGT CATCATCATC GGAAGCGGCC CTGGTGGCGC ATCTGTCGCG 
TATCGCCTCG CGCCAACCGG CAAACGCATC TTGCTGATTG AGCGTGGCGA TTATCTGCCG
CGTTCGCGTG CGAACTGGGA CTCGCAGACG GTGTTCGTCG ATGGCGCCTA TCAAGCTGAT
GAGACGTGGT ATGGCAAGAA TGGCGAGACT TTTCATCCCG GCCTGCATTA TTATGTCGGC
GGCAACTCAA AGGTCTATGG CGCGGCGCTT TTCAGACTGC GAGAGCGAGA TTTCGGCGAA
GTCCAGCACA AGGACGGCGT CTCTCCTGCA TGGCCTCTAA AGTACGAGGT GTTCGAGCCC
TATTACGGCG AGGCCGAGCG GCTGTTTCAC GTTCACGGCC AACGCGGCGA AGATCCGAAC
GAGCCCCCTT CAAGCGGTCC CTTTCCCTAT CCGCCGGTTT CCCACGAGCC GCGCATCCAA
ACGCTACAGG ACAGCCTGGC GAGAGGCGGC TTGCACCCGT TTCATCTCCC TCTTGGTATT
CTTCTTGATG AGGAGCATGG AAAAGTCACG CCGACCAGCA TCTGCATCCG CTGCGACGCG
TTTGATGGAT TTCCCTGTCT TCTGAACGGC AAGGCGGACG CGCAGGTCAT GTGCGTCGAT
CCGGCACTTA AGTTGCACCC CAACCTGACG TTGCTGACCA ACGGGTATGT CTCCAGGCTC
GGAACGGACG CCAAGGGCAG CAAAGTGAAA GACGTCGCGG TGACGCGCCA TGGCAGTGAA
GAGCACTACT CGGCCGATAT CGTAGTCGTC GCGTGCGGCG CGCTGTCCTC GGCGCTGCTT
CTGCTGCGCT CCGCGAACGA CGATCATCCC GATGGCCTCG CCAACGGTTC CGGCCAGGTC
GGGCGCAACT ACATGCGTCA CAATCAGTCC ATTCTGATGG CGCTGATGCG CGAACCCAAC
GACACGGTAT TCCAGAAAAC CCTCGCGATC TCCGATTTCT ACTTCGGATC GGATGACTGG
GAATATCCGC TCGGGTTAAT ACAGATGTGC GCCACGTCGC ATGGCGCGCA AATCAGGGGC
GAAGCGCTGC CGAGCTGGCT GGAATGGATG CCAAAGATGC CGTTCGATGA GATGGCGCGC
CACTCGATGG ATTTCTGGTT GTCGAGCGAG GATATTCCGC GGCCGGAAAA CCGCATTCGC
TACGATGGCG AGCGTGTCGT TCTGGACATC ACCGAAGGTG ATATGGAAGC TCATCATCGG
CTCAAGAAAA AGCTCGAGCA GATATTGAGC AGCGCGGGCG CTCATCCAGT ACTCCTGGAG
CGCAGCCTTT ATCTGGGCAA TGACATTCCG ATCGGCGGCA CGGCGCATCA AGCAGGGACG
GCGCGCTTCG GGACCGATCC CGCGAACTCG GTGCTGGACC TCGACTGCAA GGCCCATCAA
CTCGATAACC TGTACATTGC GGATGCCAGC TTCTTTCCAT CGATCGGGGC GGTCAATCCG
ACGCTGACAA TCATCGCCAA CGCGCTTCGT GTCGCCGACC GAATCAAGGA AAGACTGAAA
TGA
 
Protein sequence
MTQHYDVIII GSGPGGASVA YRLAPTGKRI LLIERGDYLP RSRANWDSQT VFVDGAYQAD 
ETWYGKNGET FHPGLHYYVG GNSKVYGAAL FRLRERDFGE VQHKDGVSPA WPLKYEVFEP
YYGEAERLFH VHGQRGEDPN EPPSSGPFPY PPVSHEPRIQ TLQDSLARGG LHPFHLPLGI
LLDEEHGKVT PTSICIRCDA FDGFPCLLNG KADAQVMCVD PALKLHPNLT LLTNGYVSRL
GTDAKGSKVK DVAVTRHGSE EHYSADIVVV ACGALSSALL LLRSANDDHP DGLANGSGQV
GRNYMRHNQS ILMALMREPN DTVFQKTLAI SDFYFGSDDW EYPLGLIQMC ATSHGAQIRG
EALPSWLEWM PKMPFDEMAR HSMDFWLSSE DIPRPENRIR YDGERVVLDI TEGDMEAHHR
LKKKLEQILS SAGAHPVLLE RSLYLGNDIP IGGTAHQAGT ARFGTDPANS VLDLDCKAHQ
LDNLYIADAS FFPSIGAVNP TLTIIANALR VADRIKERLK