| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_3134 |
|---|
| Symbol | |
|---|
| ID | 5159080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009467 |
|---|
| Strand | - |
|---|
| Start bp | 30805 |
|---|
| End bp | 32238 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640538470 |
|---|
| Product | glycoside hydrolase family protein |
|---|
| Protein accession | YP_001219903 |
|---|
| Protein GI | 148243663 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3664] Beta-xylosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCA TGTTCTCAAG CGACCTGAGC GGACGCACCA CAGACTTTCC GCATTTCTGG
GAGCATACGG TCGGCAGCGG CCATGCGACA CTTGCTTTGC GGGCTGATTG GCAGGCGCAA
CTCAAGCAGG CGCATGACGA ACTTGGCATG CGGCATGTCC GGTTTCACGG CATTCTGAGC
GATGACATGG GAACGCTGGT GAGTGAGGGC GACACGTTCT TCTATTCGTT TTTCAATACC
GACCAGATCT TCGATTTCCT GCTGTCGATC GGCATGAAGC CTTTTGTCGA ATTGAGTTTC
ATGCCGTCTG CTCTGTCCTC CGGTGATCAG ACGGTTTTTC ACTACCGAGC CAATGTCGGC
CGTCCCAGGG ACTATGCGCA ATGGGCCGTG CTGATCAGAA AGCTGGTACG TCATTGGGTG
GACCGTTACG GATTGGGCGA AGTGCGGCAG TGGTTCTTCG AGGTCTGGAA CGAACCGAAC
CTGACGGCAT TCGGAAACGG TCAGCAGAGC GATTATTTCG AGCTGTACCG CTACACCGTG
GAGGCCATCA AGGGCGTTGA CGCAATGCTG AAAGTCGGCG GTCCCGCCAC GGCGGCGAAT
GCGTGGATCG ATGATTTTCT GGCATTCTGC AAGGCCAATG ACCTGCCGGC CGATTTCGTC
AGTACACATC ATTATCCCAC GGATGCATTC GGCAAACCGG GCGACGACAC CGAAGCTCAA
TTAGCGGCCT CAACGCGCAG CATCCTGCGC GAACAGGCCC GCGACGTCCG AAAGAACGCC
GGCGATTTGC CGGTCTACTA CACGGAGTGG TGCACATCCT CCAATCCGCG CGATCCGATG
CATGACGATC CCTACGCCGC CGCGTTTATC GTCAAAACGA TCCTCGAAGC CAGTGGGCTG
GTTCAGGGAT ACAGCTATTG GACGTTCTCA GACATTTTCG AGGAAAACTA TTTCCCTTCG
ATCCCATTCC ACGGCGGATT CGGGTTGCTC AACATTCATG GCATCGCCAA GCCCGCCTAT
CGAGCCTTCC AGTTGCTGCA TGAACTGGGC ACGCAGATGA TGCCGGTCAA GGGGAGCCAC
GCAACCGTCG ATGCCTGGTT CGTGCGCGGC GATCAGCGTT CCACGCTGGT ATTGACGAAC
TTTGCGCTGC CGCGGCATCC GATCGAGACA GAGCAGGTTT CCTTCGAGCT CAAGTCCGCG
AAGCCGGAAT CGATGGCGTC CATTCAGCGG ATCGACCTGG AGCACGCCAA TGCGAAGCCC
CATTGGGAGC AACGGGGCAA GCCTGAATAT TTGAACGCCG CGACCATTGA AGAACTCAAG
CATCTGTCGC AGTTCCAGAG CGAACCGGTT CCGGTCAATG GTGACTCCGG GAAGTTGAAC
ATTAAAGTGT CGATGCCGCC ACAATCGGTC GCCGCGATCC ATTTCTCGAA TTGA
|
|---|
| Protein sequence | MTAMFSSDLS GRTTDFPHFW EHTVGSGHAT LALRADWQAQ LKQAHDELGM RHVRFHGILS
DDMGTLVSEG DTFFYSFFNT DQIFDFLLSI GMKPFVELSF MPSALSSGDQ TVFHYRANVG
RPRDYAQWAV LIRKLVRHWV DRYGLGEVRQ WFFEVWNEPN LTAFGNGQQS DYFELYRYTV
EAIKGVDAML KVGGPATAAN AWIDDFLAFC KANDLPADFV STHHYPTDAF GKPGDDTEAQ
LAASTRSILR EQARDVRKNA GDLPVYYTEW CTSSNPRDPM HDDPYAAAFI VKTILEASGL
VQGYSYWTFS DIFEENYFPS IPFHGGFGLL NIHGIAKPAY RAFQLLHELG TQMMPVKGSH
ATVDAWFVRG DQRSTLVLTN FALPRHPIET EQVSFELKSA KPESMASIQR IDLEHANAKP
HWEQRGKPEY LNAATIEELK HLSQFQSEPV PVNGDSGKLN IKVSMPPQSV AAIHFSN
|
|---|
| |