| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2858 |
|---|
| Symbol | folA |
|---|
| ID | 5137840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 3011875 |
|---|
| End bp | 3012372 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640534302 |
|---|
| Product | dihydrofolate reductase |
|---|
| Protein accession | YP_001218708 |
|---|
| Protein GI | 147674237 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.000404405 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGATCA GTATGATTGC CGCGATGGCA GACCAGCGCA TTATTGGTAA AGATAACCAG
ATGCCTTGGC ATCTACCGGC TGATTTCGCG TGGTTCAAAC GCTGTACATT AGGTAAGCCT
GTAGTGATGG GGCGTAAAAC CTACCAATCG ATCGGACGTC CTTTACCGGG GCGGCACAAT
ATTGTGATCT CCCGTGATGC GAGTTTGCAG ATTGAGGGGG TGGATGTGGT GACCTCCATT
GAGGCGGCGC TGGCGAAAGC GGGTGAGGTC GACGAGGTGA TGATCATCGG AGGTGGTAGC
TTGTATGCGG CCTGTTTGCC GATGGCCCAT AAACTGTATA TTACCGAGAT CCATGCAAAA
TTGGATGGTG ATACTCAGTT TCCTGAATGG GGGAGTGATT GGCTAGAGCG CTCTCGTGAG
CATTATCCTG CCGATGAAAA AAATGCCTAC GGGATGGATT TTGTGATTTT TGAACGCCAA
TATCCCCTTC CTACTTGA
|
|---|
| Protein sequence | MMISMIAAMA DQRIIGKDNQ MPWHLPADFA WFKRCTLGKP VVMGRKTYQS IGRPLPGRHN
IVISRDASLQ IEGVDVVTSI EAALAKAGEV DEVMIIGGGS LYAACLPMAH KLYITEIHAK
LDGDTQFPEW GSDWLERSRE HYPADEKNAY GMDFVIFERQ YPLPT
|
|---|
| |