Gene VC0395_A2855 details

Gene Information

• Locus tag: VC0395_A2855
• Symbol: obgE
• ID: 5135170
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 3009319
• End bp: 3010506
• Gene Length: 1188 bp
• Protein Length: 395 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640534299
• Product: GTPase ObgE
• Protein accession: YP_001218705
• Protein GI: 147675124
• COG category: [R] General function prediction only
• COG ID: [COG0536] Predicted GTPase
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR02729] Obg family GTPase CgtA

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00000349951
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGTGGAG GAAAAATGAA ATTCGTAGAT GAAGCGGTAA TTAAAGTTCA AGCTGGTGAT 
GGCGGCAACG GTGTTGTGAG CTTCTGGCGT GAAAAATTCG TTACCAATGG CGGCCCTGAT 
GGTGGTGATG GTGGTGATGG CGGCGATGTG TATATGGTCG CTGATGAAAA CCTCAACACT 
TTGATTGACT ATCGTTTCCA GCGCTTTTAT GAAGCGGAGC GTGGTAAAAA CGGCGGTGGC 
GGTAACTGTA CAGGTAAAAG CGGTAAAGAC AAAGAGCTGC GCGTACCGGT AGGTACTCGT 
GCCGTCGATA TTCACACCAA TGAAATCATT GGTGAAGTGG CCGAACATGG CAAAAAAGTC 
ATGATCGCCA AAGGTGGTTG GCACGGTTTG GGCAACGCCC GTTTTAAATC CTCGGTGAAC 
CGCTCTCCAC GTCAAAAAAC CTTGGGTACC AAGGGTGAGC TGCGTGATAT TCGTTTAGAG 
CTGCTGCTGT TGGCTGACGT TGGTATGCTC GGCATGCCAA ATGCGGGTAA ATCGACCTTC 
ATTCGTGCTG TTTCTGCGGC TAAACCTAAA GTGGCGGATT ACCCGTTTAC CACGCTAGTA 
CCAAGCCTTG GTGTGGTGAG CGTGCTGCCG GAGAAAAGCT TTGTGGTGGC TGACATCCCA 
GGCTTGATTG AAGGCGCTGC GGAAGGGGCT GGTTTAGGGA TTCGTTTCCT TAAGCACCTT 
GAACGTTGTC GCGTGCTGCT ACACATGATT GATATCATGC CTGCTGATCA AAGCGATCCT 
GCACACAATG CGTTGACCAT TATTGATGAG CTTGAACAGT ACAGTGAAAA GCTGGCGAAA 
AAGCCACGTT GGTTAGTGTT CAACAAAGTT GATCTGATGT CAGAAGAAGA AGCGGATGAG 
ATCATTCAAA ACATCATCGA TGCTCTGGCA TGGGAAGGCG ATTACTTCAA AATCTCTGCG 
GCGAATCGTC AAGGCACCAA AGAGCTGTGC ATGAAGCTTG CCGAGTTCAT GGATACCTTA 
CCAAGAGAAG CGGAAGAGAA AACAGAAGCC GAAAAAGTCG ATTTCACATG GGATTATAAC 
CATAAAGACG GATTGGCTGG TCGTGAAGTG ATCACTGAAG ATGATGACGA TTGGGATGAT 
TGGGACGATG AAGAAGATGA CGGCCACGTT ATCTATGTTC GTGACTGA 

 

Protein sequence

MSGGKMKFVD EAVIKVQAGD GGNGVVSFWR EKFVTNGGPD GGDGGDGGDV YMVADENLNT 
LIDYRFQRFY EAERGKNGGG GNCTGKSGKD KELRVPVGTR AVDIHTNEII GEVAEHGKKV 
MIAKGGWHGL GNARFKSSVN RSPRQKTLGT KGELRDIRLE LLLLADVGML GMPNAGKSTF 
IRAVSAAKPK VADYPFTTLV PSLGVVSVLP EKSFVVADIP GLIEGAAEGA GLGIRFLKHL 
ERCRVLLHMI DIMPADQSDP AHNALTIIDE LEQYSEKLAK KPRWLVFNKV DLMSEEEADE 
IIQNIIDALA WEGDYFKISA ANRQGTKELC MKLAEFMDTL PREAEEKTEA EKVDFTWDYN 
HKDGLAGREV ITEDDDDWDD WDDEEDDGHV IYVRD