| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2850 |
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| Symbol | mdh |
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| ID | 5137587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 3004202 |
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| End bp | 3005263 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640534294 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001218700 |
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| Protein GI | 147673956 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01772] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.371941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCAAAG TCGCAAAGCT GACGTTAATT GATTGTAATC AGATTGTGAT TACTATAGCG
TTTGACGGTC GGATACACCT AATCACCCTA CAAACATATA AGAGATTACT CTCAAGGAGA
TTTACGATGA AAGTCGCTGT TATTGGTGCC GCTGGCGGCA TTGGTCAAGC CCTTGCTCTG
TTACTCAAAA ACCGTCTTCC TGCTGGTTCT GATCTCGCGC TGTATGATAT TGCGCCTGTC
ACACCGGGTG TCGCTGCGGA TCTGAGTCAT ATCCCAACAC CAGTTACCAT CAAAGGCTAT
GCGGGTGAAG ACCCAACGCC TGCGCTGGAA GGTGCGGATG TGGTTCTGGT TTCTGCGGGT
GTTGCACGTA AGCCGGGTAT GGATCGTGCG GATCTGTTCA ATGTGAACGC TGGCATTGTG
AAAGCATTGG CAGAAAAAAT TGCTGTGGTG TGTCCGAAGG CCTGTGTTGG CATTATTACT
AACCCAGTGA ACACAACGGT CCCTATCGCA GCCGAAGTGC TGAAAAAAGC CGGTGTGTAT
GACAAGCGTA AGCTATTTGG TGTCACCACA CTGGATGTGA TCCGCTCTGA AACCTTCGTT
GCCGCGCTGA AAGATAAAGA TCCGGGCCAA GTTCGTGTGC CTGTGATTGG TGGTCACTCA
GGGGTTACTA TTCTGCCTCT GTTGTCGCAA GTAGAAGGCG TAAGCTTTAC CGATGAAGAA
GTTGCCGCTT TGACTAAACG TATCCAAAAC GCGGGTACCG AGGTGGTTGA AGCTAAGGCG
GGTGGCGGTT CAGCGACTCT TTCTATGGGC CAAGCGGCAT GTCGTTTTGG TCTTGCACTG
GTTAAAGCAC TGCAAGGCGA ATCTGATGTT GTTGAGTACG CGTATGTAGA AGGTGAGGGG
GAGTACGCTC CATTCTTTGC CCAACCTATC AAGCTAGGTA AAAATGGCGT TGAAGCGTTG
CTGGATATCG GCAAACTGAG CGCTTATGAG CAAGCCGCGC TGGATGGCAT GTTAGATACA
CTCAAAGGCG ACATTCAAAT CGGTGTTGAG TTTGTAAAAT AA
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| Protein sequence | MRKVAKLTLI DCNQIVITIA FDGRIHLITL QTYKRLLSRR FTMKVAVIGA AGGIGQALAL
LLKNRLPAGS DLALYDIAPV TPGVAADLSH IPTPVTIKGY AGEDPTPALE GADVVLVSAG
VARKPGMDRA DLFNVNAGIV KALAEKIAVV CPKACVGIIT NPVNTTVPIA AEVLKKAGVY
DKRKLFGVTT LDVIRSETFV AALKDKDPGQ VRVPVIGGHS GVTILPLLSQ VEGVSFTDEE
VAALTKRIQN AGTEVVEAKA GGGSATLSMG QAACRFGLAL VKALQGESDV VEYAYVEGEG
EYAPFFAQPI KLGKNGVEAL LDIGKLSAYE QAALDGMLDT LKGDIQIGVE FVK
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