| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2839 |
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| Symbol | |
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| ID | 5135630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2988773 |
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| End bp | 2992648 |
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| Gene Length | 3876 bp |
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| Protein Length | 1291 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640534283 |
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| Product | hypothetical protein |
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| Protein accession | YP_001218689 |
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| Protein GI | 147673677 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTTCGA CAGTAACCCG CCTCGGGCGG ATCCTTATGT GGCTGCTGGT CAGCCTGCTG
ATTGTGCTGG CTTTGGCCGT CACAGCCCTG CGCATTTTGC TGCCACAGAT GAACCGTTTT
CAGGCGGAGA TTCAGCATTG GCTGAATCAA AACTCGTCGG TACAAGTGGC GATTGCTGAT
GTACAAGGTT ACTGGCGCAA TACGCACCCC TCCCTCTCAC TGCAAACCTT ACAAGCCCAT
TGGCCGGACA GTAACGATAT TCAGCTGAAC GCGGCCAGTG TCGAGATTGA GTTCGACCTG
CTGCAATCAC TGTGGCAGCG GCAACCTGTG GTTGCCGATC TTACTGTCAA TGGTTTAGTC
CTTGATTTAC GGGCGATCGA CTGGCTGGCC TTAGAGCAAA ATCCTAATCC GAAACAGTCG
CGTCAAGGCC GCGTAGTCAA ACAGCTCGAT GATCTCTTAC TGCGTCAACT GGATGATTTC
ACCCTCAAAA ACTCAGCGAT TTTGTATCGC ACTTTTGCCG GCGATCTGCG CCAACTCGAT
ATTGAAAAAC TGCGTTGGCA AAACCAAGGT CTACGCCACT TTGCTGAAGG GGTGGTCAGT
ATTGCAGGCA TCAACATCAA CTCTTTGTTG GTAAGCGCTA ACTTTATTGA TCATGGTTCG
CTGCGCGATG TGTCGGGCGA TTTCTATGTC AGCGCGGATA AAGTGCGCGT ATTACCTTGG
TTAACACGAT ATTTAAAAGA TCAAACTGGC ATTCAAAAAG GCCAAGTAAG CTTAAATGCT
TGGGCGACCC TTGAACACAA TCAGCCGAAA GATGGCTATG TCGAATTTAA GCCTTCGGAG
TTGGTGTGGC AAAACGGTGA GCAGACCCAT GAACTGCTGC TTGAGTCAGG GATTGTCGAA
CTCAAACCAA CCGAGAAAGG TTGGCAAGTG AATGCCCACT CACTGCGTTT ACGAAGTGAT
GATGAGCTAT GGCCGCTGTT GGATGTGGCG ATGGATTGGC AGCCCGATGA GTGGCGGCTT
AATCTCTCTC AGCTCAATAT TGAGAACCTG TTACCTCTGG CTAAGTTGAT CCCCGAGTCA
CAAACGCTCA ATCATTGGCT GACAACCTTA AAGCCGAAAG GGACTTTGGA AGATGTGCGG
ATTGCCAAAG GCGCAACGTT GGAATCATTA CGTTATTCGG CATCATTAAT TGATGGCGGA
ATAGCGCAAT GGGAGTTGCT ACCCCAAGTC AATGCTTTGC AAGCGCAAAT TCAAGGTTCA
CCGAGCAAAG CACTCATTAA AGCCAGCATG GTGGATGACG TCTTGCCCTA TGGTGAGGTG
TTCCAAGCTC CTCTGAATAT CCGCCAAGGC GCAGTGAATC TGGTCTGGCA GCAAGAGCAA
TATGGATGGT CGCTCTGGTC CGATAAAGTC ACGGTAGCGA CGCCGGATCT GCAAGCGCTG
GGCGCATTTC GCCTCGATTT CCCGGATGAT GCTAGCCCAT TCCTCTCATT TTATGCCGAA
GCCGATCTCT TTAATGCTGG GGAGACATGG CGCTACTTGC CGACGTTGGC GTTAGGCCGT
GAGCTGACCG ATTATCTCTC GACCGCGATT CAAGCGGGAC AAGTCAATAC CGCGAAACTG
ATCTGGTATG GCGCGTTAGA TCAGTTTCCT TATCGTATGC ACAATGGCGT GTTCCAAGCT
TGGGTTGGTT TAAAAGAGGC CAAATTTGCC TTTGATACGG CTTGGCCACC GATCACCGAT
TTGCAGCTCG ATCTGCTGTT TGAAAATGAC GCCATGTATC TCGACTCGCG CTCTGCTACC
TTGATGGAAG TCAGTGCTGA ACGGATCACC GGTCGTATTC CTGAATTGGC CGAGCTGGGT
CACATTGAGA TTGAAGCGGT AGCCAGTGCC CAGCAAGGTA ACGCGATTCG CAATTACATG
ATGGCGACCC CGTTAGTCGA TTCCGTAGGC GCGGCGCTGA CCACGATTCA AGTTAAAGGA
CCGGTGCGCT CAGAGTTTCA ACTCAATATT CCATTCCACA GTGGCGCAGA GCCGCGGGCT
TGGGGCTTTG CCGAGCTGAG CAATAACGCG GTGGATATTG ATACACCGCC GATGAGCCTT
ACCTCTGTGT CTGGCAAAAT CGAGTTCGAT AATGACCGCG TGAGTGCAGC GGGGCTTGAT
GCCCGTTTGC TCAAACAGCC CGTCTCGATC GATTTTAAAG GCGAAGATGC CAAGCGAGGT
TATGCGGTTG GCATTGATAT GGTTGGGGAT TGGGAAGTCA AACCGCTGAT CCCGTTTGTG
GGCGAACGCT GGTTAAGCCG AGTGAAAGGC CATGCACCTT GGCAGGCGAG CGTTGACATT
CAACTCAATG ATGTGGGCTT TACTTACCAA TTGGATGGTA AGGCGGATTT GCGCGGGTTA
GAGAGCCGCT ACCCCTTCCC ACTTAAAAAA GCACTCAAAG TGAAAGGGCA GGCTCTGTTG
CAAGCCTCGG GCAATCAAGA GATGGTTTCC GCGCGCTTGC AACTGCCGCA AGCAAAATAT
CAGGCCGAGA TTGATTTAAC GCCTAAAGTA CCGGTTCTGA AAGCCACGAA TCTGGTGCTT
GGGCAGGGCA GTTTTAAAAT TAGCCCAGTG GTGGGGCATC ATGTCCAGTT GCGTAGCCAA
GCGTTCAATC TGGATGATTG GCTCTCCATT TTGAATGAAA AGCCTGCGCC TAAATCGCGA
AAATCTAAGC TAGCCAGTTT AAATACGCCT GCATTTCCAA TGCCGGAGCG AGTGGATGCG
GCGGTTAAAG AGCTGACCTT TGCAGGGTTG GATTGGCATG ACGTGGATCT TAATGCGCGG
CGCAAAGACC TCGGCTGGCT TCTCAATCTG GATAGCCAAG AGATCAAAGG CCAAGCCAAT
TATATTGAGC CTTATGATTT GAGTATTGCG CTTGAGCGCC TGCATCTGTT TTTGCCTCAG
CTCGAGGCGG GGGAAGAGGC GTTGCTGGTC GATCTTGATC GCCAGAAATT ACCGCTTATC
ACCGATTTTG ATCGTAAATT CCATCAATGG ATGCCTAACC TTACGTTGAC CATCAAAGAC
TTTTGGTTGC AAGGCTACAA AATCGGCCAA GCCAATGTCG ATTTTCAGCG CCAAGGGGAT
ACGCTGCTGT GGAAGAGCAT TGATTTCACT AGTGGTACCA ACCAACTGCA TGTTAATGGC
ACTTGGACGC TGACCGATAC TCAGAGCCGA ACTCAAATGA ATTTGGATAT GAAGGGCGAT
AACAACAGTG ACTTGATGGC ACGTTTTGGG ATCAACTCAG GTATCCAGCG TGCGCCGTTT
GAGATTACCG CAAGCACGCA ATGGGATGGC GCTCCGTGGT CAATGCAGGT CAACACTTTG
CAAGGCAAGG TGGATACCAA ACTTGGAAAA GGGGTGATTT CCGATGTGAG TGGGGCGGCA
AGGTTACTTG GTCTATTTAG CCTTGATTCA ATCATACGCA AAATGCAGCT CGACTTTAGC
GATGTATTTG ATAAAGGGAT GGCGTTTGAT TCGATCTCCG GCAGTGGTGA GCTTTCCCAA
GGAATTTTTG TCACCAATAA CATCAAAATG GATGCGGTGG CCGGAGAGAT GACGATTAAA
GGTCTCGCCG ATCTCAATAC GCGCACGGTC GATGCAGAAG TGAATTTCGT CCCAGACATT
ACATCAGGCA TTCCGGTATT GACGGCGTTT GCGGTGACAC CTCAAACCGC CTTGTATGTG
CTGGCGATCA CTACGGTGAT CTCTCCGGTA GTGGAAGTGT TTACTCAAGT CAACTATGAA
GTAAAAGGAC CGCTCGATTC ACCGACAGTG AAAGAGCTTT CGCGCAGTAA AGGCGAATTC
AAGTTGCCGG AAAAGCTGCG TAAACTGACT GAATAG
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| Protein sequence | MISTVTRLGR ILMWLLVSLL IVLALAVTAL RILLPQMNRF QAEIQHWLNQ NSSVQVAIAD
VQGYWRNTHP SLSLQTLQAH WPDSNDIQLN AASVEIEFDL LQSLWQRQPV VADLTVNGLV
LDLRAIDWLA LEQNPNPKQS RQGRVVKQLD DLLLRQLDDF TLKNSAILYR TFAGDLRQLD
IEKLRWQNQG LRHFAEGVVS IAGININSLL VSANFIDHGS LRDVSGDFYV SADKVRVLPW
LTRYLKDQTG IQKGQVSLNA WATLEHNQPK DGYVEFKPSE LVWQNGEQTH ELLLESGIVE
LKPTEKGWQV NAHSLRLRSD DELWPLLDVA MDWQPDEWRL NLSQLNIENL LPLAKLIPES
QTLNHWLTTL KPKGTLEDVR IAKGATLESL RYSASLIDGG IAQWELLPQV NALQAQIQGS
PSKALIKASM VDDVLPYGEV FQAPLNIRQG AVNLVWQQEQ YGWSLWSDKV TVATPDLQAL
GAFRLDFPDD ASPFLSFYAE ADLFNAGETW RYLPTLALGR ELTDYLSTAI QAGQVNTAKL
IWYGALDQFP YRMHNGVFQA WVGLKEAKFA FDTAWPPITD LQLDLLFEND AMYLDSRSAT
LMEVSAERIT GRIPELAELG HIEIEAVASA QQGNAIRNYM MATPLVDSVG AALTTIQVKG
PVRSEFQLNI PFHSGAEPRA WGFAELSNNA VDIDTPPMSL TSVSGKIEFD NDRVSAAGLD
ARLLKQPVSI DFKGEDAKRG YAVGIDMVGD WEVKPLIPFV GERWLSRVKG HAPWQASVDI
QLNDVGFTYQ LDGKADLRGL ESRYPFPLKK ALKVKGQALL QASGNQEMVS ARLQLPQAKY
QAEIDLTPKV PVLKATNLVL GQGSFKISPV VGHHVQLRSQ AFNLDDWLSI LNEKPAPKSR
KSKLASLNTP AFPMPERVDA AVKELTFAGL DWHDVDLNAR RKDLGWLLNL DSQEIKGQAN
YIEPYDLSIA LERLHLFLPQ LEAGEEALLV DLDRQKLPLI TDFDRKFHQW MPNLTLTIKD
FWLQGYKIGQ ANVDFQRQGD TLLWKSIDFT SGTNQLHVNG TWTLTDTQSR TQMNLDMKGD
NNSDLMARFG INSGIQRAPF EITASTQWDG APWSMQVNTL QGKVDTKLGK GVISDVSGAA
RLLGLFSLDS IIRKMQLDFS DVFDKGMAFD SISGSGELSQ GIFVTNNIKM DAVAGEMTIK
GLADLNTRTV DAEVNFVPDI TSGIPVLTAF AVTPQTALYV LAITTVISPV VEVFTQVNYE
VKGPLDSPTV KELSRSKGEF KLPEKLRKLT E
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