| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2833 |
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| Symbol | |
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| ID | 5137466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2980314 |
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| End bp | 2984072 |
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| Gene Length | 3759 bp |
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| Protein Length | 1252 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640534277 |
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| Product | hypothetical protein |
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| Protein accession | YP_001218683 |
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| Protein GI | 147673465 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000270915 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATAAGT GGTTAGCCAA AACGCTAGTG GGATTGGGAT GTTTTGCATT GCTCTCTGCT
TATGCTTTGG CATTTCAGGA TATTGATCAC TCAATTTATT TTCCCAGTGT TGTTCAAGGC
CATGGCAGTT GTAGTGGCGC ACCAAATCCG CAGTTAATTC AGTACAACAG CGCAAGAATT
AACGGAACGA ATAATTCAGT TGTAGATTTT TGTTCTATTA ATGCTACCAA TGAACGGCCT
AATACTCGTT GTGATAATAA TCTTTGCCAA GTTTCTGGTA ATACTGTGCC TTCGCTTAGC
CTTGCTGGGA TTAATGCATT TAAAACATCA AGCGTTAGTG GAACGGAAAT AGGTTGGTGT
AATAGTGGGC AAAGTATTCT TCTATCAAAA ACGAATATTG GGACTGTACA ACTTTATGCC
TCATGTACAT TAAGTTTTAC CGGACAGACT GAATATAAAA TTAAATCTTT GGATATGGGA
AGTGGTGCGA CTCTTGTTCT TTCCAGCGGT GATTACTGGA TTGAATCTCT GCAACTTAAC
CAAGGAGGTG AAGTCGTTGT GGATGGGGAT GTACGCCTTT TTATTCGCAA TAATTCTGAT
TGGAATAGTG CACAGATTAA TGTCTCAGGA TCAGGCAATT TAACCATTGT TGGTTATAAC
AACATCACAT TAAATCAATC GAATCAGGTA AAGGCTTATC TCTATGTCGG TGGCACATTA
ACTCTGCATA ACACATCTGT CATTAATGGA CGGGTCACAA GTCGTCGATT ATTTATGGAG
GCTAATACTG AGATTAACCA AAATGAACAG CAAGGCTATG CTTGTTTTAC CGATGATTTT
AATCGCTCAT CTCTTGGACA AAATTGGATT CCCTACACCA GTAGCGGTAA TTTCACACCG
AGTATTATTA GTAACCGAAT GCGCTTAACA GAAGCGATTA CCAATCAAGC GACAGCAGTG
ACTTATCAGC GTATTTTTCC TGCAGCAGGC AATTTGGTTA CCGTAGAGTT TGATTATTAT
GCATGGGCGA ATTTAACCGG TAATGGAGCC GATGGGGTCT CGGTAATTTT TTCGGATGCG
ACGGTCACTC CGAGAACGGG CGGTTTTGGT GGCTCTCTAG GTTATGCGCA AAGAACCGAT
ACTAATCCTG ATACACCAGG TTTTGCGGGG GGATGGTTGG GTGTCGGCTT AGATGAATGG
GGTAACTATT CGAACGCGAC GGAAGGGCGA CAAGGTGGCC CCGGTTTTCG TCAGCAAGCT
GTGGCGATTC GTGGCTCTGA GTCAGCGAAT TATCAATATT TAGTGGGCAC TGCTGCCAAC
CTCAATCCTA AATTAGATGT GCGTCGGACA TGTCAATGGT GGGGATGTTC TTTTTCTGGT
GCAGGCCCCG GCCATCGTTA TTTCATCACC ATCGATTCGC GCAGTGGGGG GGGCGTTTGG
GTTCGTGTCG ATCGCTCTGT GAATGGCACT ATGCAAACGG TCATTGATTG GCATAACGTG
TTGAGTAATC CCAATCAAGG GGCAACCCCC GCGGACTTTC TACTTTCTCT CGCGGGCTCG
ACAGGCGCAT CAGTCAATAA CCATGAAATT GAGAACTTCA AAGTGTGCGC ATTGAAATCT
CGCCCAGTTG GACAATTAAT TGACCACTTC CGTTTCACTC TGCCACAGCA AGGGCTGACT
TGTAGCGCTT CTGAGGTTCA GATCAAAGCT TGTGCGAATG ACAATTGTAG TCAGCTGTAC
ACGGATCCTG TGACGGCTAC GCTCTCCCCA AATTCAGCAC CGAGTGCGAC TGGTGGTTGG
TTGGGTGGCT CACAAGTGAA TTTCAATAAT GGAATTGCCA CGGCGCAACT GAGACGTAAT
AGTGTAGGGA ATGTGTCAGT CAACGTACTT GGCTCGACTC CTGCCAGTAA GCCTTTTCAG
GTCAACCTCT GTAGCTACAC GAACAATCCC AACAGTTATT CGACGGCCAA TTGTACGGTC
AATTTTGCAG ACAGCGGTTT TATTGTCGAT GTACCCAATG CTTATGCTAA CCAGACGGTG
ACGGGCACCA TAAAAGCGGT GCGCAAAGAT AATGCTTCAC AACAATGCTT ACCAAGTTTT
GGCAATGTCC AAAAATCAGT GGCGTTTTGG AGTGAATACC TCAATCCGAC GGCCAATAAT
AGTGGATTCC AATCTGTCAG TGTGGGGGTA AATGGAACGC CAATTGGTCA GTCTGCAAAT
AACGCGACCT CGATAAGTTT GAACTTTAAT CAAAATGGTG AGGCGAGTTT CCCGATCTCT
TATCGTGAAG TGGGTAGTCT AGCTCTGCAT GCTCGTTTCA CGGGCAGCGG TGATGAGCAA
GATCTGTTGC TTGAAGGGCA AGATAGTTTT ATCCGTGTTC CTAGGGCATT GGTACTCAGT
GCGAATAATC CATATAACCC GACACATCCA AATGGCCAAT GCTCTGCTGA GAATATCAGT
TGTAATGTTT TTGCGAGAGC CGATGAAAAC TTTGATCTGA TTATTCGAGC CGTTGTTGCT
GCGCCCATTG AAGATAATGA TTTCACAAAC AATTTAACGG CTTATAACTA CCAGCAACAA
AATATCGCGC TACAACACAC TCTGGTGCAG CCATCGGCAG GGCAGTCGGG TGTGTTAGGC
GTAAATGAAT ACACTCATCT ACTTGGGGGT ACAACGACTA TTGCGCAAAA AGTGAGTGAA
GTCGGGGTGT TTGATTTCTC TTTGTTCGCA CCCACCCATT ATCTTGGCCT TGACTTAGCC
AGCGCCAATC TACCGATTGC GGTGACGTCA ACAGGATCGA TTGGGCGCTT TATTCCCGCT
TACTTTTCGG TATCTCCGAT GAGTAATGTC ACCTTAGATG CGGCATGTAA AACCGGTAAT
GCCTTTAGTT ATCTCGGTCA GCCGTTCGAG TATTCCAATA GCCCGGGACT CTATTTACAG
CCTAAATCCG CCAATAATGC GGATACGCAA AATTACCTCA TCGACCCTTG GTGGCGTTAT
AACAATCAAT GGAATGGTCG CACTTACAGT GATAGCGCAA ACGGTGTGAA TCTTGGTTTC
GATAATCTGC AGACTTCGCC CATCAGCAGA CAGGCATTAA ACAACAGTGG CATTGTCTTA
AATGGGGAAA GGGTGTGGTA TCAAAAACCG TTACAACCTA AACCGGTGTT TAATTCAGCG
TTTGATTTGA CTTTGAATGC CTCTAACTTA ACGGATCAGG ATGGGGTTTG TTACCGACAA
AATGCGTCAT CCCCTTGTTT GGGATATACG TTTTCACACA TTGATGGAGC TATGCCGCTG
TATTGGGGCA AATTAGTCAT TCAAGATGTG TATGGGCCAG AGACTCAAGC CTCAGAGCAA
CCCATCTATG TCGAGCATTT CACCAACAAT GGTTTTGTTC GTACGATTGA GGACAGTTGC
ACCGCACTGC CTGCGATCAC AGGCTTTACC TTGCAATCGG ATCCTAATAA CAACGGTTAT
ACCGTATTGA CCACTGGCGT TGCGGTTCCT CCCCAAGTCT TGGCTGAGCA TTCGGCGGCT
AATTTAAACT CAGGTCAGCG CGCCATTCGC TTTAGTGCGC CGGGAGCAGG GGCTCTTGGT
GTGATTGATT CGGTGTTGGA TCTCAATGCG CACAACTTGC TGTGGCTTGC CGAAGACAAA
GATGGCGACA ACAATTTTGA TCAAACCACC CAAGGTCGAG CGCAATTTGG CTTGTATCGC
GGCAGTGATC GGGTGATCTG GTGGCGCGAA TCGAATTAA
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| Protein sequence | MNKWLAKTLV GLGCFALLSA YALAFQDIDH SIYFPSVVQG HGSCSGAPNP QLIQYNSARI
NGTNNSVVDF CSINATNERP NTRCDNNLCQ VSGNTVPSLS LAGINAFKTS SVSGTEIGWC
NSGQSILLSK TNIGTVQLYA SCTLSFTGQT EYKIKSLDMG SGATLVLSSG DYWIESLQLN
QGGEVVVDGD VRLFIRNNSD WNSAQINVSG SGNLTIVGYN NITLNQSNQV KAYLYVGGTL
TLHNTSVING RVTSRRLFME ANTEINQNEQ QGYACFTDDF NRSSLGQNWI PYTSSGNFTP
SIISNRMRLT EAITNQATAV TYQRIFPAAG NLVTVEFDYY AWANLTGNGA DGVSVIFSDA
TVTPRTGGFG GSLGYAQRTD TNPDTPGFAG GWLGVGLDEW GNYSNATEGR QGGPGFRQQA
VAIRGSESAN YQYLVGTAAN LNPKLDVRRT CQWWGCSFSG AGPGHRYFIT IDSRSGGGVW
VRVDRSVNGT MQTVIDWHNV LSNPNQGATP ADFLLSLAGS TGASVNNHEI ENFKVCALKS
RPVGQLIDHF RFTLPQQGLT CSASEVQIKA CANDNCSQLY TDPVTATLSP NSAPSATGGW
LGGSQVNFNN GIATAQLRRN SVGNVSVNVL GSTPASKPFQ VNLCSYTNNP NSYSTANCTV
NFADSGFIVD VPNAYANQTV TGTIKAVRKD NASQQCLPSF GNVQKSVAFW SEYLNPTANN
SGFQSVSVGV NGTPIGQSAN NATSISLNFN QNGEASFPIS YREVGSLALH ARFTGSGDEQ
DLLLEGQDSF IRVPRALVLS ANNPYNPTHP NGQCSAENIS CNVFARADEN FDLIIRAVVA
APIEDNDFTN NLTAYNYQQQ NIALQHTLVQ PSAGQSGVLG VNEYTHLLGG TTTIAQKVSE
VGVFDFSLFA PTHYLGLDLA SANLPIAVTS TGSIGRFIPA YFSVSPMSNV TLDAACKTGN
AFSYLGQPFE YSNSPGLYLQ PKSANNADTQ NYLIDPWWRY NNQWNGRTYS DSANGVNLGF
DNLQTSPISR QALNNSGIVL NGERVWYQKP LQPKPVFNSA FDLTLNASNL TDQDGVCYRQ
NASSPCLGYT FSHIDGAMPL YWGKLVIQDV YGPETQASEQ PIYVEHFTNN GFVRTIEDSC
TALPAITGFT LQSDPNNNGY TVLTTGVAVP PQVLAEHSAA NLNSGQRAIR FSAPGAGALG
VIDSVLDLNA HNLLWLAEDK DGDNNFDQTT QGRAQFGLYR GSDRVIWWRE SN
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