| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2821 |
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| Symbol | mshM |
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| ID | 5137538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2971477 |
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| End bp | 2972322 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640534265 |
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| Product | MSHA biogenesis protein MshM |
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| Protein accession | YP_001218671 |
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| Protein GI | 147673106 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTTAT CGCACTTTGG CCTTGAACAG TTACCTTTTC ATCTGACTCC GGATACCGAA
TTGTTTCTGG GGCTCGCACC GCACTTTGAG GCGATTCAAA CCTTAAGTGC GGCGATTGAG
ATGGGGGAAG GTGTCAGCAA GCTCACTGGA GAAGTCGGTA CTGGAAAAAC CATGGTCTGC
CGCATGCTGT TGACGCACTT AGGCGATGAG GTGGCGCTGA TTTATCTGCC GAATCCTATG
CTGAGCGGCG AAGAATTAAG GCAGGCGGTC GCCGCGGAAT TACAGTTGGA TGTAGCATCG
CCCGTGCGAG TGGTCGAGCA GATCCAAACA CGACTGATTG AGCTTCACCA ACAAGGTAAA
CGTGTGGTTG CTTTGGTCGA TGAAGCGCAG GCGTTGTCTG ATGAGGCGCT AGAAACTTTG
CGCTTATTTG GCAACTTAGA AACGGAACAA ACTAAGCTGC TGCAGATTGT CTTAATTGGG
CAACCTGAAC TCGATGTTCG ACTCGCGCAG CATCACTTGC GTCAGTTTCG GCAGCGGATC
ACTTTTAACG CCAATTTGCG CCCGTTAACT CAAGCTGAAA CCGAGGTGTA CATTGAGAGC
CGTTTACAGA AAGCCCAAGC GCCGTATCCG CTGTTCAATG CGACCCTGAA AAAAGCCGTC
TGGCGTGCAT CACAAGGGAT CCCGCGTTTG ATCAATCAAA TTTGTCATAA GGCGCTGTTA
CTCGCTTGGC ATGAGCAGAG CCCGTTGGTC AATCAACATC ATCTTTTTGC AGCGATTCAT
GACACCTATG ACAGCTGCAA ACCAAGATTT AAAACCCCAA TTTTGTGGGG ATGGAGCAAA
CCATGA
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| Protein sequence | MYLSHFGLEQ LPFHLTPDTE LFLGLAPHFE AIQTLSAAIE MGEGVSKLTG EVGTGKTMVC
RMLLTHLGDE VALIYLPNPM LSGEELRQAV AAELQLDVAS PVRVVEQIQT RLIELHQQGK
RVVALVDEAQ ALSDEALETL RLFGNLETEQ TKLLQIVLIG QPELDVRLAQ HHLRQFRQRI
TFNANLRPLT QAETEVYIES RLQKAQAPYP LFNATLKKAV WRASQGIPRL INQICHKALL
LAWHEQSPLV NQHHLFAAIH DTYDSCKPRF KTPILWGWSK P
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