Gene VC0395_A2818 details

Gene Information

• Locus tag: VC0395_A2818
• Symbol: mshJ
• ID: 5135270
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 2968818
• End bp: 2969468
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640534262
• Product: MSHA biogenesis protein MshJ
• Protein accession: YP_001218668
• Protein GI: 147675395

Plasmid Coverage information

• Num covering plasmid clones: 54
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATCGG GTTGGCAAAA CTTTGAAAGT CGCTTCTCCG CACTGTCGCA ACGAGAGAAG 
GTGTTAATTA CGCTGTGCGG TAGCGTGCTT ATTGTGATGA TGCTATTGCT GGGATTGATT 
GAGCCCGCCT TAAAACAGGG CCAAGCACGT CAATTGCAAA TGCAAACCCT GACGTCAAGC 
AACCTGCAAC TTCAAGGCGA AATCATGGCG CTGCAAGCGC AGTTGGCGAA AAATCCAGAC 
CAAGAGTTGG ATGTGGAGCT GAGCCAACTG ACGTTGCAAA GTCAGGAAAT TTCCGAGCTG 
CTGGCGGCCA AAATGACCTC GATGGTTGCT CCATCAGAGA TGCCTAATTT GCTCGAAAGC 
GTATTAAAAC AAGGGCAACA GTTGAAGTTG GTCTCCTTGG AGTCCTTACC CGCAGAGCCG 
ATTGTGCGCG CAACGGAATC GAGATCGGAG TCTGAATACT ATATTCACCC TGTGCGTATG 
GAGTTAACTG GCTCCTATTT TGCTATCCGA GATTATCTGC AAGCCTTGGA AGCTTTGCCT 
GTGAAATATT ATTGGCGTCA CTTTCATTAT CGAGTGGAAA GCTACCCACA GGCTCGGGTG 
ATCCTAGAAG TCTATACTTT AGGCAGTCGA GAGGAGTTTA TCGGTGGTTA G 

 

Protein sequence

MKSGWQNFES RFSALSQREK VLITLCGSVL IVMMLLLGLI EPALKQGQAR QLQMQTLTSS 
NLQLQGEIMA LQAQLAKNPD QELDVELSQL TLQSQEISEL LAAKMTSMVA PSEMPNLLES 
VLKQGQQLKL VSLESLPAEP IVRATESRSE SEYYIHPVRM ELTGSYFAIR DYLQALEALP 
VKYYWRHFHY RVESYPQARV ILEVYTLGSR EEFIGG