| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2810 |
|---|
| Symbol | |
|---|
| ID | 5135761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 2956695 |
|---|
| End bp | 2957813 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640534254 |
|---|
| Product | aminotransferase, class V |
|---|
| Protein accession | YP_001218660 |
|---|
| Protein GI | 147673503 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAATTC GCAGTTTTAT TCCCCCGCAT CGGATTTTGA TGGGCCCTGG ACCTTCGGCT
ATTTCCCCTC AAGTCCTGCA AGCGCTCAGC CGCCCAACGG TTGGTCATCT TGATCCACTA
TTTATCGGTA TGATGGATGA GCTGAAACAG CTCTTGAAAT ATGCTTTCCA AACGGAAAAC
GAATTTACGA TTGCCGTTTC TGCGCCGGGT AGTGCGGGTA TGGAAGCCTG TTTTGTTAAC
CTCGTCGAGC CGGGCGATAA AGTGATTGTT TGCCGCAATG GGGTGTTTGG TGAGCGGATG
CGCGATAACG CTGTGCGTTG TGGGGCCGAA GTTGTGGTGG TTGATGATGA ATGGGGTTGC
CCAGTCAGCG TTGAAAAAGT GCAAGCCACG ATAGATGAGC ATCCGGATGC GAAAATACTG
GCTTTTGTAC AAGCAGAAAC GTCAACCGGA GCCTTAAGTG ATGCGCAAGC GTTAGGTGCT
CTAGCGAAGC AGCATGGTTT GTTGACGATT GTTGATGCGG TGACCTCGCT CGGTGGCGTT
CCCCTGCTGG TGGATGAGTG GCAACTGGAT GCGGTGTATT CTGGCAGCCA AAAATGCCTC
TCTTGTGTGC CGGGATTGGC TCCGTTGACG TTTTCACCTC GTGCCATTGA GAAGATTCAA
TCGCGAAAAA CACCGATTCA AAGCTGGTTC CTCGATCAAA GCTTGGTATT AGGTTATTGG
AGTGGCGCGG GCAAACGTAG TTATCACCAT ACCGCTCCGG TTAATAGTTT GTACGCGCTG
CACGAAGCGT TACTGCTTTT GCAACAAGAA GGTTTAGAGC ACGCGTGGCA GCGCCATCGT
CTGATGCATG AGAAGCTTAA ACAAGGGTTA GAGCAACTCG GTTTTCAATT TGTGGTCGCA
GAGCCGTATC GTTTACCGCA GTTGAACGCG ATTTATGTGC CGGAAGGTAT TGAGGAAGCC
AAAGTACGCA GCCATCTACT CAATGAATAC AATTTGGAAA TTGGTGCTGG GCTCGGGGCA
TTAGCCGGCA AAGCGTGGCG CATTGGGGTT ATGGGCTATG GCGCGCGTTC AGAAAATATC
GCGCTCTGTT TGCGAGCGCT CGAAGAGTCG CTGCGTTAA
|
|---|
| Protein sequence | MTIRSFIPPH RILMGPGPSA ISPQVLQALS RPTVGHLDPL FIGMMDELKQ LLKYAFQTEN
EFTIAVSAPG SAGMEACFVN LVEPGDKVIV CRNGVFGERM RDNAVRCGAE VVVVDDEWGC
PVSVEKVQAT IDEHPDAKIL AFVQAETSTG ALSDAQALGA LAKQHGLLTI VDAVTSLGGV
PLLVDEWQLD AVYSGSQKCL SCVPGLAPLT FSPRAIEKIQ SRKTPIQSWF LDQSLVLGYW
SGAGKRSYHH TAPVNSLYAL HEALLLLQQE GLEHAWQRHR LMHEKLKQGL EQLGFQFVVA
EPYRLPQLNA IYVPEGIEEA KVRSHLLNEY NLEIGAGLGA LAGKAWRIGV MGYGARSENI
ALCLRALEES LR
|
|---|
| |