| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2809 |
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| Symbol | lysC |
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| ID | 5137116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2954876 |
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| End bp | 2956231 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640534253 |
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| Product | aspartate kinase III |
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| Protein accession | YP_001218659 |
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| Protein GI | 229259768 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCACAT TTAACGTCGC CAAATTTGGT GGTACTAGTG TCGCCAACTT TGAAGCCATG
AGCCGTTGTT CGGCCATTAT CGAAAACAAT CCACAAACAC GCTTAGTGGT CAGCAGCGCC
TGCTCTGGGG TGACCAATTT ATTGGTCGAA CTCGCCAATG GCGTGGCCTC AACTGAACGC
CGCCAAGCCA TTTTGCAACA GTTGGCCGAT ATCCATTATG TGATTATCGA CCAGCTCGCC
GATCCGACAC GCGTCGAAAA AGAAGTCAAA GCCGTGCTAG ATTCTGTGGC CAGTGCTGCA
GAAGCGGCGT CATTTCAATC CAGTAAAAAA CTGACCGACC ATCTCGTCGC CTGTGGTGAG
CTCATCTCCA CCTACATCCT CACTCAACTG ATGCGTGAGC GTGGTGTCGA CGCGGTACGT
TTTGATATCC GCGAAGTGCT ACGCACTGAC GATCATTACG GTCGCGCCGA ACCTCAATTG
AAAGAAATCG CTCAATTAGC CAAAGAAAAA CTGGTGCCAC TGTGTGAGCA ATATGTCGTC
GTGACTCAAG GTTTTATCGG CTCTGATGCG CAAGGTAATA CCACCACTTT AGGCCGCGGC
GGCAGTGATT ATTCAGCCGC TTTGATTGCC GAAGCCGTGC AAGCAAGTGG TTTAGAGATT
TGGACTGACG TACCGGGAAT CTACAGTACC GATCCACGTA TCGCGCCAAA AGCGGCGCCG
ATTCCTGAGA TAAGCTTTAG CGAAGCCTCA GAAATGGCCA ATTTTGGTGC CAAGATTTTG
CATCCATCCA CCTTGCTTCC AGCGGTACGC CATGGCATTC CCGTGTTTGT TGGCTCATCA
AAAGAACCGG AAAAAGGTGG CACTTGGATC CGTAAACAAG TCGAAAGCGC GCCACTGTAT
CGCGCACTTG CACTACGCTG TAATCAAACC ATGGTGACAC TGCGTAGCGC GCAGATGTTC
CATGCTTACG GTTTCCTCGC CAAAGTGTTC GAAATTCTCG CCAAGCATAA AATTTCGGTC
GATCTCATCA CCACATCAGA AATCAGCGTG TCACTGACAC TGGATAAAAC CGATACCTCA
GGCGGTGCGC CAGAATTGCC TGAAGCGGTG CGCGCCGAGT TAGAGGAGCT ATGTACGGTC
GAAGTCGAAT ACAACCTGTG TCTGATTGCT CTGATCGGCA ACAAGATGAA AGAGAGCCGC
GGCTACGCGA AGCAAGTGTT CAGTGTATTG GAAGATTACA ACCTCCGTAT GATTTGCTAT
GGCGCCAGCG CGCATAACCT CTGTTTCTTG CTGCATGAAT CTGTCTCTAA ACAAGCGGTG
CAGAAGCTGC ATAAAGAGCT GTTTGAGCAA GAGTAA
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| Protein sequence | MSTFNVAKFG GTSVANFEAM SRCSAIIENN PQTRLVVSSA CSGVTNLLVE LANGVASTER
RQAILQQLAD IHYVIIDQLA DPTRVEKEVK AVLDSVASAA EAASFQSSKK LTDHLVACGE
LISTYILTQL MRERGVDAVR FDIREVLRTD DHYGRAEPQL KEIAQLAKEK LVPLCEQYVV
VTQGFIGSDA QGNTTTLGRG GSDYSAALIA EAVQASGLEI WTDVPGIYST DPRIAPKAAP
IPEISFSEAS EMANFGAKIL HPSTLLPAVR HGIPVFVGSS KEPEKGGTWI RKQVESAPLY
RALALRCNQT MVTLRSAQMF HAYGFLAKVF EILAKHKISV DLITTSEISV SLTLDKTDTS
GGAPELPEAV RAELEELCTV EVEYNLCLIA LIGNKMKESR GYAKQVFSVL EDYNLRMICY
GASAHNLCFL LHESVSKQAV QKLHKELFEQ E
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