| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2779 |
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| Symbol | rpsR |
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| ID | 5136137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2926973 |
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| End bp | 2927200 |
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| Gene Length | 228 bp |
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| Protein Length | 75 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640534225 |
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| Product | 30S ribosomal protein S18 |
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| Protein accession | YP_001218637 |
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| Protein GI | 147675772 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0238] Ribosomal protein S18 |
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| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000000612799 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCGTT TCTTCCGTCG TCGTAAATTC TGCCGTTTTA CTGCAGAAGG CGTACAAGAG
ATTGATTACA AAGACGTAGC AACTCTCAAG AACTACATCA CTGAAGCTGG TAAAATCGTT
CCTAGCCGTA TCACTGGTAC AAGTGCTAAA TATCAGCGTC AGCTAGCTCG TGCAATCAAA
CGCGCTCGCT ACCTAGCTCT ACTGCCATAC ACTGACAAAC ATCAGTAA
|
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| Protein sequence | MARFFRRRKF CRFTAEGVQE IDYKDVATLK NYITEAGKIV PSRITGTSAK YQRQLARAIK
RARYLALLPY TDKHQ
|
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