Gene VC0395_A2774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2774 
SymboltufA 
ID5137756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2923846 
End bp2925030 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content49% 
IMG OID640534220 
Productelongation factor Tu 
Protein accessionYP_001218632 
Protein GI147674589 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000437207 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTAAAG AAAAATTTGA ACGTACGAAA CCGCACGTAA ACGTTGGTAC TATCGGCCAC 
GTTGACCACG GTAAAACAAC TCTAACTGCA GCTATCTGTA CTGTACTTGC AAAAGTATAC
GGCGGTAAAG CTCGTGACTT CGCGTCAATC GACAACGCAC CAGAAGAGCG TGAGCGTGGT
ATTACAATCA ATACTTCTCA CGTAGAGTAC GATACTCCAA ACCGTCACTA CGCACACGTA
GACTGTCCAG GACACGCGGA TTATGTTAAG AACATGATCA CCGGTGCAGC ACAGATGGAC
GGCGGTATCC TAGTTGTAGC GGCAACTGAC GGTCCAATGC CACAAACTCG TGAGCACATC
CTGCTGGGTC GCCAAGTAGG TATTCCTTAC ATCATCGTAT TCATGAACAA GTGTGACATG
GTTGACGATG AAGAGCTTCT AGAGCTGGTA GAGATGGAAG TTCGTGAGCT GCTGTCTGAG
TACGATTTCC CAGGTGATGA CCTGCCAGTA ATCCAAGGTT CAGCACTAGG CGCGCTAAAC
GGCGAAGCAC AGTGGGAAGC GAAGATTGTT GAGCTAGCAG AAGCACTGGA TACATACATT
CCAGAGCCAG AGCGTGCAGT AGACATGGCA TTCCTGATGC CAATCGAAGA CGTATTCTCA
ATCCAAGGTC GTGGTACAGT AGTAACTGGC CGTATCGAGC GCGGCATCCT GAAAGTGGGT
GACGAAGTAG CGATCGTTGG TATCAAAGAG ACAGTAAAAA CGACCTGTAC AGGTGTAGAG
ATGTTCCGTA AGCTGCTTGA CGAAGGTCGT GCAGGTGAGA ACGTAGGTGC ACTGCTACGT
GGTACTAAGC GTGAAGAAGT AGAGCGTGGT CAAGTACTGG CGAAGCCAGG TTCAATCACA
CCACACACTA AGTTCGAATC AGAAGTATAC GTACTGTCAA AAGACGAAGG TGGCCGTCAT
ACTCCATTCT TCAAAGGTTA CCGTCCACAG TTCTACTTCC GTACAACTGA CGTAACAGGC
AGCATTGAGC TACCAGAAGG CGTAGAAATG GTAATGCCAG GCGACAACGT GAAGATGGTT
GTAGACCTGA TTGCACCAAT CGCGATGGAC GAAGGTCTAC GCTTCGCTAT CCGTGAAGGT
GGCCGTACTG TAGGTGCTGG TGTTGTAGCT AAGATCATCG CTTAA
 
Protein sequence
MSKEKFERTK PHVNVGTIGH VDHGKTTLTA AICTVLAKVY GGKARDFASI DNAPEERERG 
ITINTSHVEY DTPNRHYAHV DCPGHADYVK NMITGAAQMD GGILVVAATD GPMPQTREHI
LLGRQVGIPY IIVFMNKCDM VDDEELLELV EMEVRELLSE YDFPGDDLPV IQGSALGALN
GEAQWEAKIV ELAEALDTYI PEPERAVDMA FLMPIEDVFS IQGRGTVVTG RIERGILKVG
DEVAIVGIKE TVKTTCTGVE MFRKLLDEGR AGENVGALLR GTKREEVERG QVLAKPGSIT
PHTKFESEVY VLSKDEGGRH TPFFKGYRPQ FYFRTTDVTG SIELPEGVEM VMPGDNVKMV
VDLIAPIAMD EGLRFAIREG GRTVGAGVVA KIIA