Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2774 |
Symbol | tufA |
ID | 5137756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2923846 |
End bp | 2925030 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640534220 |
Product | elongation factor Tu |
Protein accession | YP_001218632 |
Protein GI | 147674589 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000000437207 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTAAAG AAAAATTTGA ACGTACGAAA CCGCACGTAA ACGTTGGTAC TATCGGCCAC GTTGACCACG GTAAAACAAC TCTAACTGCA GCTATCTGTA CTGTACTTGC AAAAGTATAC GGCGGTAAAG CTCGTGACTT CGCGTCAATC GACAACGCAC CAGAAGAGCG TGAGCGTGGT ATTACAATCA ATACTTCTCA CGTAGAGTAC GATACTCCAA ACCGTCACTA CGCACACGTA GACTGTCCAG GACACGCGGA TTATGTTAAG AACATGATCA CCGGTGCAGC ACAGATGGAC GGCGGTATCC TAGTTGTAGC GGCAACTGAC GGTCCAATGC CACAAACTCG TGAGCACATC CTGCTGGGTC GCCAAGTAGG TATTCCTTAC ATCATCGTAT TCATGAACAA GTGTGACATG GTTGACGATG AAGAGCTTCT AGAGCTGGTA GAGATGGAAG TTCGTGAGCT GCTGTCTGAG TACGATTTCC CAGGTGATGA CCTGCCAGTA ATCCAAGGTT CAGCACTAGG CGCGCTAAAC GGCGAAGCAC AGTGGGAAGC GAAGATTGTT GAGCTAGCAG AAGCACTGGA TACATACATT CCAGAGCCAG AGCGTGCAGT AGACATGGCA TTCCTGATGC CAATCGAAGA CGTATTCTCA ATCCAAGGTC GTGGTACAGT AGTAACTGGC CGTATCGAGC GCGGCATCCT GAAAGTGGGT GACGAAGTAG CGATCGTTGG TATCAAAGAG ACAGTAAAAA CGACCTGTAC AGGTGTAGAG ATGTTCCGTA AGCTGCTTGA CGAAGGTCGT GCAGGTGAGA ACGTAGGTGC ACTGCTACGT GGTACTAAGC GTGAAGAAGT AGAGCGTGGT CAAGTACTGG CGAAGCCAGG TTCAATCACA CCACACACTA AGTTCGAATC AGAAGTATAC GTACTGTCAA AAGACGAAGG TGGCCGTCAT ACTCCATTCT TCAAAGGTTA CCGTCCACAG TTCTACTTCC GTACAACTGA CGTAACAGGC AGCATTGAGC TACCAGAAGG CGTAGAAATG GTAATGCCAG GCGACAACGT GAAGATGGTT GTAGACCTGA TTGCACCAAT CGCGATGGAC GAAGGTCTAC GCTTCGCTAT CCGTGAAGGT GGCCGTACTG TAGGTGCTGG TGTTGTAGCT AAGATCATCG CTTAA
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Protein sequence | MSKEKFERTK PHVNVGTIGH VDHGKTTLTA AICTVLAKVY GGKARDFASI DNAPEERERG ITINTSHVEY DTPNRHYAHV DCPGHADYVK NMITGAAQMD GGILVVAATD GPMPQTREHI LLGRQVGIPY IIVFMNKCDM VDDEELLELV EMEVRELLSE YDFPGDDLPV IQGSALGALN GEAQWEAKIV ELAEALDTYI PEPERAVDMA FLMPIEDVFS IQGRGTVVTG RIERGILKVG DEVAIVGIKE TVKTTCTGVE MFRKLLDEGR AGENVGALLR GTKREEVERG QVLAKPGSIT PHTKFESEVY VLSKDEGGRH TPFFKGYRPQ FYFRTTDVTG SIELPEGVEM VMPGDNVKMV VDLIAPIAMD EGLRFAIREG GRTVGAGVVA KIIA
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