| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2766 |
|---|
| Symbol | fkpA |
|---|
| ID | 5135778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 2917676 |
|---|
| End bp | 2918455 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640534212 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase, FKBP-type |
|---|
| Protein accession | YP_001218624 |
|---|
| Protein GI | 147673443 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000000918987 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAC TTTTTAAAGT GTCACTGCTG GCTGCGACGG TAATGCTCGC GGTTGGTTGT
CAGAAAGAAG AAGCACCAAA AACCGAAACC ACGCCTGCCG CACAAACCGC AGCAGCGAAA
ACGGTTGAGT TCAAGTCTGA AGATGATAAA GCGGCGTACG CAATTGGCGT ATCGTTTGCA
AACTATCTTA AAACCAGTAT TGAGAAGCCA AGTGAAATTG GCATCGATCT GAACAAAGAT
CTGGTACTGA AAGGTATTGA ACATGTGTTT GCTGGCAACC CAGAAATGAG CGAAGAAGAG
ACACGTGCTG CGCTTGAAGC GTTAGATAAG CGTGTGGCTG AAACCATGCA AGCCAAAGCC
GCTGAAAAAG CAGCAGAGAA CAAGAAGAAA GGTGATGAGT TCCGCGCCCA ATTCGAGAAA
GAGTCTGGTG TTGTAAAAAC ACAATCGGGT CTGCTGTATC AAGTGATGAC ACCAGCAGAA
GGTGATAAGC CAAAAGATAC CGATACTGTG CAAGTTCACT ACAAAGGTAC CTTGATTGAC
GGTTCGCAAT TCGACAGCTC TTATGAACGT GGCGAGCCTG CGACTTTCCC TCTAAACCGT
GTGATCCCAG GCTGGACCGA GGGTGTACAA CTGATGTCAG TCGGTTCTAA GTTTAAACTG
GTTATTCCGC CTGAACTGGC TTACGGCGAG CAAGATACGC CAACCATTCC TGCCAACTCA
ACCTTAGTGT TTGAAGTGGA ATTGTTGAAA ATTGAAAACG GCAAAGACGC TGCTCAGTAA
|
|---|
| Protein sequence | MKSLFKVSLL AATVMLAVGC QKEEAPKTET TPAAQTAAAK TVEFKSEDDK AAYAIGVSFA
NYLKTSIEKP SEIGIDLNKD LVLKGIEHVF AGNPEMSEEE TRAALEALDK RVAETMQAKA
AEKAAENKKK GDEFRAQFEK ESGVVKTQSG LLYQVMTPAE GDKPKDTDTV QVHYKGTLID
GSQFDSSYER GEPATFPLNR VIPGWTEGVQ LMSVGSKFKL VIPPELAYGE QDTPTIPANS
TLVFEVELLK IENGKDAAQ
|
|---|
| |