| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2761 |
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| Symbol | hflC |
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| ID | 5137119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2915056 |
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| End bp | 2916036 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640534207 |
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| Product | hflC protein |
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| Protein accession | YP_001218619 |
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| Protein GI | 147673768 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0386111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAGT TATTAATCCC TAGTATCGTT CTGATCATCG CTGCTTTATT GATGTCGATG
TTCGTGATCC CAGAGGGCGA GCGCGGAATC GTGATCCGTT TTGGTCGAGT GTTGAAAGAC
AATAACGATC TGGCGAGAAT TTATGAACCG GGTCTGCATT TTAAAATGCC ACTGTTTGAT
CGTGTAAAAA CCTTAGATGC ACGTATTCAA ACCATGGATG GCCGTTCAGA CCGTTTCGTG
ACGTCCGAGA AAAAAGACGT GATCATCGAT ACTTACGTTA AGTGGCGTAT CGAAGATTTC
GGCCAATACT ACTTGGCAAC CGGTGGTGGT AATGCGTTGA CCGCAGAAGC CCTATTGGAG
CGTAAAGTGA CTGACGTCTT GCGTTCTGAA ATCGGTGCGC GTGAAATCAA GCAGATCGTT
TCTGGCCCTC GCAATGTTGC CGTGTTACCT GAAAATGCAG ATTCTTCTGA ATTGACGACG
GAAGCGGCAA AAGAAGCGAT GGAGATTGAT GGTCAGCGTG ATCAAATCAT GTCTGAAGTA
CTGAACGATA CTCGTGAAAG TGCGATGAAA GACTTAGGGG TATATGTGGT CGACTTCCGT
ATGAAGAAGA TCAATCTACC GGATGAGATC AGCGAATCTA TCTATCGCCG TATGCGTGCG
GAACGTGAAT CGGTAGCTCG TAAGCACCGT TCACAAGGTC GTGAAAAAGC GGAAGTGATC
CGTGCGCAAG CCGAGCTTGA AGTAGCAACC ATTCTTGCTG AAGCAGATAA GACGGCGCGT
GTGACTCGTG GTACTGCAGA TGCAGAAGCC GCGAAGATTT ACTCGGATGC TTATAAGAAA
GATCCTGAGT TCTTCAGCTT CCTGCGTTCA CTGCGCGCCT ACGAGAAATC GTTTAACAGC
AAAAATGATA TTCTGGTATT GGATCCAAAC AGTGAGTTCT TCCAATACAT GAATAATGCG
AAAGGCGCAG CCGCCAAGTA A
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| Protein sequence | MRKLLIPSIV LIIAALLMSM FVIPEGERGI VIRFGRVLKD NNDLARIYEP GLHFKMPLFD
RVKTLDARIQ TMDGRSDRFV TSEKKDVIID TYVKWRIEDF GQYYLATGGG NALTAEALLE
RKVTDVLRSE IGAREIKQIV SGPRNVAVLP ENADSSELTT EAAKEAMEID GQRDQIMSEV
LNDTRESAMK DLGVYVVDFR MKKINLPDEI SESIYRRMRA ERESVARKHR SQGREKAEVI
RAQAELEVAT ILAEADKTAR VTRGTADAEA AKIYSDAYKK DPEFFSFLRS LRAYEKSFNS
KNDILVLDPN SEFFQYMNNA KGAAAK
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