Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2736 |
Symbol | |
ID | 5137446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2895452 |
End bp | 2896600 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640534183 |
Product | peptidase family protein |
Protein accession | YP_001218603 |
Protein GI | 147674849 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG4942] Membrane-bound metallopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0304965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCAA CGGATCCGCA CGCGATTTTC AGTGACTTTC TAGGAAAAAC CTTGACCCGA CGTCTGCTGG TCTGCCTGTT ATTTATGGTT TCGCCGTCGC TCTTTGCGGC TACGCAACAG GAGTTAACGG GGGTAAAAAG TGAAATATCT CGCCAACAAC AATCACTGGC CGAACAACAA AAATCGCTCG ACCAACTACA ACAAGCCCTT AAACAACAAG AGCTTGGCAT CAACAGTATC GAAAATCAGA TCACGAAAAC CAAAAACGAT CTGGAGAATG CCAATCGCAA CATTGCTCAG CTCAATAGTA ATATTCAGGC GCTGGAAACT CAGAAACAGC AACAAGCCGA TAAACTCGAA CGCCTACTGC AGACCTACTA TCTCACTAAA CGCTCACTGA CGAATGGTCA ATTTTTTCAT CGCAGTGCCG ATGAAGACCG CATCAGCCAG TACTATCAAC ATTTGGCAAA AAGCCGCGCG CAAGCTATCG AAGCTTTAGA AAAAACCCAA GCCGATCTCA ATGCCAGTCA ACAGCAGAGA CAAGCTGAGC GTGAACAGAT TGAGAAATTA CTGGCAGAGC AGACCCAACA GCGAGACAAA CTGGCTAAAA CGCAAAGTGA GCGTAAGCAA ACCGTAAAGA AAATTGAGAG CAGCATTTCC GGCGACAAAG TCTACCTTGC CGAATTGCAG CGCAACGAAA CGCGCCTCAA AGCTGAAATA GCCAAAGCCG CCAAACGCAA TGCAGTATTG ATGAATGGCA TTGCGAGCCA ACGCGGTAAG CTACCGTGGC CACTGAAAGG GCGTGTGCTA CATAACTTCG GTGAACGCCA AACTGGGCAG ATTGATTGGA AAGGTTTGGT CATTGATGCC AATTACGGCC AAGAGGTCAA AGCGGTTTAT CCGGGCACGA TCGTGTTTGC CGAGTATCTG CGAGGTTATG GCTTGGTTGT GCTCCTCGAC CACGGCAAAG GTGATATGAC ACTGTATGGC TTCAACCAAA CTCTGCTCAA GAAAGAGGGC GACAAAGTTA TCGCAGGTGA AACCATTGCT CTTGCGGGTG ATACTGGTGG TCAATCACGC CCTGCCCTCT ACTTTGAAAT CCGTCGTAAT AGCCGCGCGG AAAACCCTTC GCAGTGGTTA CAGCGCTAA
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Protein sequence | MTATDPHAIF SDFLGKTLTR RLLVCLLFMV SPSLFAATQQ ELTGVKSEIS RQQQSLAEQQ KSLDQLQQAL KQQELGINSI ENQITKTKND LENANRNIAQ LNSNIQALET QKQQQADKLE RLLQTYYLTK RSLTNGQFFH RSADEDRISQ YYQHLAKSRA QAIEALEKTQ ADLNASQQQR QAEREQIEKL LAEQTQQRDK LAKTQSERKQ TVKKIESSIS GDKVYLAELQ RNETRLKAEI AKAAKRNAVL MNGIASQRGK LPWPLKGRVL HNFGERQTGQ IDWKGLVIDA NYGQEVKAVY PGTIVFAEYL RGYGLVVLLD HGKGDMTLYG FNQTLLKKEG DKVIAGETIA LAGDTGGQSR PALYFEIRRN SRAENPSQWL QR
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