Gene VC0395_A2734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2734 
SymbolhemE 
ID5137374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2892596 
End bp2893675 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content51% 
IMG OID640534180 
Producturoporphyrinogen decarboxylase 
Protein accessionYP_001218600 
Protein GI147675642 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID[TIGR01464] uroporphyrinogen decarboxylase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.961609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGAATCA CCATGACTGA ATTAAAAAAT GATCGCTACC TGCGTGCTTT GCTCAAGCAG 
CCAGTCGATT ACACTCCTGT ATGGATGATG CGCCAAGCGG GGCGTTATCT CCCTGAATAC
CGTGCCACTC GTGCTCAAGC GGGTGATTTT ATGGCGCTGT GCAAGAATGC AGAGTTGGCT
TCAGAAGTGA CTTTACAGCC GCTGCGACGT TTTCCGCTTG ATGCTGCGAT CCTGTTTTCT
GATATTTTGA CGATTCCTGA TGCGATGGGA CTTGGGCTGC GTTTTGCGGC GGGCGAAGGA
CCGGTCTTTG AGCGTCCCAT CACCTGCAAA GCCGATGTCG ATAAGATTGG TATTCCCGAT
CCTGAAGGGG AATTGCAGTA TGTGATGAAC GCGGTGCGTC AAATTCGCAA AGATCTGCAA
GGTGAAGTGC CGCTGATTGG TTTCTCTGGC AGTCCTTGGA CGCTCGCCAC TTATATGGTT
GAAGGTGGCA GTTCAAAAGC CTTCACCAAA ATCAAAAAGA TGATGTACAG CGAGCCTACC
GTGCTGCATG CGCTGTTAGA TAAATTAGCT GACAGTGTGA TCAGCTACCT GAATGCTCAG
ATTAAAGCCG GCGCACAAGC GGTGATGGTA TTTGATACTT GGGGCGGCGT GTTAACACCG
CGTGATTATC AACAGTTCTC TTTGCAATAC ATGCACAAGA TTGTCGATGG CTTGATTCGT
GAAAACGAAG GCCGCCGTGT ACCAGTCACG CTGTTTACCA AAAATGGTGG CATGTGGCTG
GAGCAGATCG CGGCTACAGG TTGTGATGCT GTGGGTTTAG ATTGGACGAT CAATATCGCC
GACGCTAAAG CGCGTGTGGG AGATAAAGTG GCACTGCAAG GCAATATGGA TCCTTCTATT
CTGTATGCTC CTGCCCCACG AATTCGTGAA GAGGTGGCGA GTATTTTGGC TGGATTTGGC
CAAGGTGGCA CAGGCCACGT GTTCAACTTG GGGCATGGTA TTCATTTGGA CGTGCCGCCT
GAAAATGCCG GTGTGTTTGT TGAAGCGGTG CATGAGCTTT CGAAGCCGTA CCATCCATAG
 
Protein sequence
MGITMTELKN DRYLRALLKQ PVDYTPVWMM RQAGRYLPEY RATRAQAGDF MALCKNAELA 
SEVTLQPLRR FPLDAAILFS DILTIPDAMG LGLRFAAGEG PVFERPITCK ADVDKIGIPD
PEGELQYVMN AVRQIRKDLQ GEVPLIGFSG SPWTLATYMV EGGSSKAFTK IKKMMYSEPT
VLHALLDKLA DSVISYLNAQ IKAGAQAVMV FDTWGGVLTP RDYQQFSLQY MHKIVDGLIR
ENEGRRVPVT LFTKNGGMWL EQIAATGCDA VGLDWTINIA DAKARVGDKV ALQGNMDPSI
LYAPAPRIRE EVASILAGFG QGGTGHVFNL GHGIHLDVPP ENAGVFVEAV HELSKPYHP