Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2734 |
Symbol | hemE |
ID | 5137374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2892596 |
End bp | 2893675 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640534180 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_001218600 |
Protein GI | 147675642 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.961609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGAATCA CCATGACTGA ATTAAAAAAT GATCGCTACC TGCGTGCTTT GCTCAAGCAG CCAGTCGATT ACACTCCTGT ATGGATGATG CGCCAAGCGG GGCGTTATCT CCCTGAATAC CGTGCCACTC GTGCTCAAGC GGGTGATTTT ATGGCGCTGT GCAAGAATGC AGAGTTGGCT TCAGAAGTGA CTTTACAGCC GCTGCGACGT TTTCCGCTTG ATGCTGCGAT CCTGTTTTCT GATATTTTGA CGATTCCTGA TGCGATGGGA CTTGGGCTGC GTTTTGCGGC GGGCGAAGGA CCGGTCTTTG AGCGTCCCAT CACCTGCAAA GCCGATGTCG ATAAGATTGG TATTCCCGAT CCTGAAGGGG AATTGCAGTA TGTGATGAAC GCGGTGCGTC AAATTCGCAA AGATCTGCAA GGTGAAGTGC CGCTGATTGG TTTCTCTGGC AGTCCTTGGA CGCTCGCCAC TTATATGGTT GAAGGTGGCA GTTCAAAAGC CTTCACCAAA ATCAAAAAGA TGATGTACAG CGAGCCTACC GTGCTGCATG CGCTGTTAGA TAAATTAGCT GACAGTGTGA TCAGCTACCT GAATGCTCAG ATTAAAGCCG GCGCACAAGC GGTGATGGTA TTTGATACTT GGGGCGGCGT GTTAACACCG CGTGATTATC AACAGTTCTC TTTGCAATAC ATGCACAAGA TTGTCGATGG CTTGATTCGT GAAAACGAAG GCCGCCGTGT ACCAGTCACG CTGTTTACCA AAAATGGTGG CATGTGGCTG GAGCAGATCG CGGCTACAGG TTGTGATGCT GTGGGTTTAG ATTGGACGAT CAATATCGCC GACGCTAAAG CGCGTGTGGG AGATAAAGTG GCACTGCAAG GCAATATGGA TCCTTCTATT CTGTATGCTC CTGCCCCACG AATTCGTGAA GAGGTGGCGA GTATTTTGGC TGGATTTGGC CAAGGTGGCA CAGGCCACGT GTTCAACTTG GGGCATGGTA TTCATTTGGA CGTGCCGCCT GAAAATGCCG GTGTGTTTGT TGAAGCGGTG CATGAGCTTT CGAAGCCGTA CCATCCATAG
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Protein sequence | MGITMTELKN DRYLRALLKQ PVDYTPVWMM RQAGRYLPEY RATRAQAGDF MALCKNAELA SEVTLQPLRR FPLDAAILFS DILTIPDAMG LGLRFAAGEG PVFERPITCK ADVDKIGIPD PEGELQYVMN AVRQIRKDLQ GEVPLIGFSG SPWTLATYMV EGGSSKAFTK IKKMMYSEPT VLHALLDKLA DSVISYLNAQ IKAGAQAVMV FDTWGGVLTP RDYQQFSLQY MHKIVDGLIR ENEGRRVPVT LFTKNGGMWL EQIAATGCDA VGLDWTINIA DAKARVGDKV ALQGNMDPSI LYAPAPRIRE EVASILAGFG QGGTGHVFNL GHGIHLDVPP ENAGVFVEAV HELSKPYHP
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