| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2728 |
|---|
| Symbol | rplJ |
|---|
| ID | 5135135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 2881298 |
|---|
| End bp | 2881786 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640534174 |
|---|
| Product | 50S ribosomal protein L10 |
|---|
| Protein accession | YP_001218594 |
|---|
| Protein GI | 147674689 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0244] Ribosomal protein L10 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000000179395 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTAA ATCTTCAAGA CAAAAAAGCA ATTGTTGCTG AAGTCAACGA AGCGGCCAGT
GGTGCACTTT CTGCAGTTGT TGCTGACTCT CGTGGTGTTC AAGTTGCTGC GATGACTAAT
CTGCGTAAAC AAGCTCGTGA AGCGGGCGTT TACCTGAAAG TTGTTCGTAA CACACTGGCA
CGTCGCGCAG TAGAAGGCAC AGCTTACGAA TGTCTGAAAG ACGTATTCGT AGGCCCTACT
TTGATCGGCT TCTCTAACGA GCACCCAGGT GCTGCAGCGC GTCTTTTCAA AGACTTCGCT
AAAGAGAACA AAGCATTCGA GATCAAAGCA GCTGCATTTG AAGGTGTACT GACTGACCCT
GAAGTACTAG CGACACTACC AACTTACGAC GAAGCGATTG CACGCCTGAT GATGTGCATG
AAAGAAGCTT CTGCTGGCAA GCTGGTTCGT ACAATCGCTG CTGTCCGCGA TCAAAAAGAA
GCTGCATAA
|
|---|
| Protein sequence | MALNLQDKKA IVAEVNEAAS GALSAVVADS RGVQVAAMTN LRKQAREAGV YLKVVRNTLA
RRAVEGTAYE CLKDVFVGPT LIGFSNEHPG AAARLFKDFA KENKAFEIKA AAFEGVLTDP
EVLATLPTYD EAIARLMMCM KEASAGKLVR TIAAVRDQKE AA
|
|---|
| |