Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2717 |
Symbol | birA |
ID | 5136324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2874760 |
End bp | 2875722 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640534163 |
Product | biotin--protein ligase |
Protein accession | YP_001218587 |
Protein GI | 147675672 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region [TIGR00122] BirA biotin operon repressor domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0000120108 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGAGC ACAGCGCTAA ACTAGCCATA CTCAAACAAT TAGCCGATGG CGATTTTCAC TCTGGTGAAG TGTTGGGTGC TCAGCTGGGG ATCTCGCGAG CAGCCATCAG TAAGCATATT CAGGGCATCC GCGACTGGGG TGTGGATGTG TTTCGTGTAC AGGGTAAAGG GTATCAACTT GCTCAAGCGA TGACGTTGCT CGATCAATCG GTAATCCAAT CGCAAGTGAA TAATCCTGTC GAGCTGCATC CGATTATTGG CTCGACCAAT CAATATCTGC TCGATCATGT CGAGACGCTG GTATCGGGAA CGGTCTGTTT AGCAGAATAT CAAGCCAGTG GTCGTGGTCG GCGTGGTCGG CATTGGGTTT CTCCATTTGG CGCTAATCTT TATCTCTCGA TCTATTGGCG TTTAGATGCC GGTATGGCAG CCGCGATGGG GCTGAGTTTA GTCGTGGGTG TGGCCATTGT TGAAGCGCTG GAAGCCATGG GAGTGGATGG CGTTAAACTA AAATGGCCAA ACGATCTCTA TTATCAAGAT AAAAAGTTGG CGGGCATTTT AGTCGAAATG TCTGGTCAAG CTGGTGCGGC AGCACATTTA GTGATCGGCA TGGGGATCAA CCTTGCTATG CGCGATAACG AGGGCAATAT CGATCAGCCT TGGATAAGTC TTGCAGAAGT GACTGGCCAA AGCCGGATTG ATCGTAATGC TTTAGCGATT AATCTGATTG CTGCGCTAGA TCGCACCTTA CGCCAGTATG AAATTTCAGG TATGCAAAAC TTTGTTGAGC GTTGGAATCG TTGGGATAAC TTCATCGGTC GTCCAGTTAA ACTGCTGATG GGGGCGAATG AGGTGCGCGG TATTGAGCGC GGGATTGATG AACACGGCGG CGTATTATTA GAAACCGAAG AGGGGTTGAA AAGTTTTATT GGCGGTGAGA TATCCCTACG TAAAAACGAC TAG
|
Protein sequence | MKEHSAKLAI LKQLADGDFH SGEVLGAQLG ISRAAISKHI QGIRDWGVDV FRVQGKGYQL AQAMTLLDQS VIQSQVNNPV ELHPIIGSTN QYLLDHVETL VSGTVCLAEY QASGRGRRGR HWVSPFGANL YLSIYWRLDA GMAAAMGLSL VVGVAIVEAL EAMGVDGVKL KWPNDLYYQD KKLAGILVEM SGQAGAAAHL VIGMGINLAM RDNEGNIDQP WISLAEVTGQ SRIDRNALAI NLIAALDRTL RQYEISGMQN FVERWNRWDN FIGRPVKLLM GANEVRGIER GIDEHGGVLL ETEEGLKSFI GGEISLRKND
|
| |