Gene VC0395_A2717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2717 
SymbolbirA 
ID5136324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2874760 
End bp2875722 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content49% 
IMG OID640534163 
Productbiotin--protein ligase 
Protein accessionYP_001218587 
Protein GI147675672 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000120108 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAGC ACAGCGCTAA ACTAGCCATA CTCAAACAAT TAGCCGATGG CGATTTTCAC 
TCTGGTGAAG TGTTGGGTGC TCAGCTGGGG ATCTCGCGAG CAGCCATCAG TAAGCATATT
CAGGGCATCC GCGACTGGGG TGTGGATGTG TTTCGTGTAC AGGGTAAAGG GTATCAACTT
GCTCAAGCGA TGACGTTGCT CGATCAATCG GTAATCCAAT CGCAAGTGAA TAATCCTGTC
GAGCTGCATC CGATTATTGG CTCGACCAAT CAATATCTGC TCGATCATGT CGAGACGCTG
GTATCGGGAA CGGTCTGTTT AGCAGAATAT CAAGCCAGTG GTCGTGGTCG GCGTGGTCGG
CATTGGGTTT CTCCATTTGG CGCTAATCTT TATCTCTCGA TCTATTGGCG TTTAGATGCC
GGTATGGCAG CCGCGATGGG GCTGAGTTTA GTCGTGGGTG TGGCCATTGT TGAAGCGCTG
GAAGCCATGG GAGTGGATGG CGTTAAACTA AAATGGCCAA ACGATCTCTA TTATCAAGAT
AAAAAGTTGG CGGGCATTTT AGTCGAAATG TCTGGTCAAG CTGGTGCGGC AGCACATTTA
GTGATCGGCA TGGGGATCAA CCTTGCTATG CGCGATAACG AGGGCAATAT CGATCAGCCT
TGGATAAGTC TTGCAGAAGT GACTGGCCAA AGCCGGATTG ATCGTAATGC TTTAGCGATT
AATCTGATTG CTGCGCTAGA TCGCACCTTA CGCCAGTATG AAATTTCAGG TATGCAAAAC
TTTGTTGAGC GTTGGAATCG TTGGGATAAC TTCATCGGTC GTCCAGTTAA ACTGCTGATG
GGGGCGAATG AGGTGCGCGG TATTGAGCGC GGGATTGATG AACACGGCGG CGTATTATTA
GAAACCGAAG AGGGGTTGAA AAGTTTTATT GGCGGTGAGA TATCCCTACG TAAAAACGAC
TAG
 
Protein sequence
MKEHSAKLAI LKQLADGDFH SGEVLGAQLG ISRAAISKHI QGIRDWGVDV FRVQGKGYQL 
AQAMTLLDQS VIQSQVNNPV ELHPIIGSTN QYLLDHVETL VSGTVCLAEY QASGRGRRGR
HWVSPFGANL YLSIYWRLDA GMAAAMGLSL VVGVAIVEAL EAMGVDGVKL KWPNDLYYQD
KKLAGILVEM SGQAGAAAHL VIGMGINLAM RDNEGNIDQP WISLAEVTGQ SRIDRNALAI
NLIAALDRTL RQYEISGMQN FVERWNRWDN FIGRPVKLLM GANEVRGIER GIDEHGGVLL
ETEEGLKSFI GGEISLRKND