Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2715 |
Symbol | |
ID | 5137786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2873231 |
End bp | 2873677 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640534161 |
Product | hypothetical protein |
Protein accession | YP_001218585 |
Protein GI | 147673831 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.000871455 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGACA AGCACGAAAG ACCAATGTTA GAGTTTCAGC AATTTGCCCC CATTAAGCTC CCGCTTATCA AACGTTTTTA TAAAAACCAC TATCCAGGGA GCAAACCCAA AAGTGATGAA CAGGTGATTG TTGCTCTCAA GGATCGTGAG ATCGTGGGCG TGGTACGTTT TCGTATGATT GGTCAATATC GCCTACTGAC TGGCATGGCA GTGGAAGCCC AGAGCCGTCA ACAAGGGATT GGTAAGCAAC TGCTCGACTA CTGCCAAAAG CAATGGCTCA ATCCAGCAAC CTTTTGTTTT GCTTATACCC ATCTCGAACA TTTCTATCAG CAAGGCCATT TTATTCAAAT TGCACCTAAT GCTTTACCCG CCGAGCTCCA TCTACTCTTT GAGCGTTACT CGAGATCTGG TAAGGATCTC ATTCCGATGC AATATCAAGC GAAGTAA
|
Protein sequence | MADKHERPML EFQQFAPIKL PLIKRFYKNH YPGSKPKSDE QVIVALKDRE IVGVVRFRMI GQYRLLTGMA VEAQSRQQGI GKQLLDYCQK QWLNPATFCF AYTHLEHFYQ QGHFIQIAPN ALPAELHLLF ERYSRSGKDL IPMQYQAK
|
| |