Gene VC0395_A2704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2704 
Symbolfre 
ID5137788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2864934 
End bp2865644 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content49% 
IMG OID640534152 
ProductFMN reductase 
Protein accessionYP_001218582 
Protein GI147673428 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000147117 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATTC AATGCCAAGT TAAGTCTGTG CAGCCGCTGG CGACGCATAC TTACCAAATC 
CTATTACAAC CCGAGCACGC GGTGGCTTAC CAAGCCGGGC AGTATTTAAT GGTGGTGATG
GGCGAAAAAG ATAAGCGACC ATTTTCACTT GCCAGTAGTC CTTGCCGTAG CAATGGCGAG
CTCGAACTGC ATATTGGTGC GGCGGATCAC AGCGCCTTTG CCCACCAAGT CGTGGAAAAA
TTTCAGCAAG CCCATCTTAA TCAGACATGG GTTGAAGTAG ATGTGCCACA TGGCAATGCC
GCATTACAAG AGAGTGAGCG ACCTCTACTC TTAATCGCTG GCGGGACCGG CTTTAGCTAT
GTGCGTTCCA TCTTAGATCA TTGCCTCTCG CAAGGTAAAA CTCAGCCTAT CTACCTGTAT
TGGGGCGCGC GTGATGCAGC TCAGCTGTAC GCACTGAATG AGTTGCAAGA GCTTGCCAAG
CAACATGCTC ATTTGCAGGT TGTTCCAGTG GTCGAGCAAG CACAAGATGA CTGGGCTGGA
AAAGTTGGCA ATGTACTGCA AGCGATTAAC AACGACTTTG CAAGTTTAGA AGCATTTGAC
ATCTATATAG CAGGTCGCTT TGAGATGGCT GGAGCCGCAC GTGAGCAATT TACTCAAAAC
AAACAAGCTC GACGCGATCG AATGTTTGCC GATGCTTACG CCTTTATTTA A
 
Protein sequence
MIIQCQVKSV QPLATHTYQI LLQPEHAVAY QAGQYLMVVM GEKDKRPFSL ASSPCRSNGE 
LELHIGAADH SAFAHQVVEK FQQAHLNQTW VEVDVPHGNA ALQESERPLL LIAGGTGFSY
VRSILDHCLS QGKTQPIYLY WGARDAAQLY ALNELQELAK QHAHLQVVPV VEQAQDDWAG
KVGNVLQAIN NDFASLEAFD IYIAGRFEMA GAAREQFTQN KQARRDRMFA DAYAFI