| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2686 |
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| Symbol | |
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| ID | 5136148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2842289 |
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| End bp | 2843284 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640534134 |
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| Product | NifR3/Smm1 family protein |
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| Protein accession | YP_001218564 |
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| Protein GI | 147675018 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000024991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGGTAC GAAGCTGTGA AGACGTTTTG AAAATCGGAA ATCATCAACT TAAGAACAAT
CTGATCGTCG CCCCGATGGC GGGTGTCACC GACAGACCCT TTCGAGAGTT GTGTTTACGC
TACGGGGCAG GAATGGCGGT CAGTGAAATG ATGTCATGCA ATCCTGCGTT GTGGAAAACG
GCCAAATCGC AAAACCGCAT GGTACATGAA GGCGAATCGG GCATTCGCTC AGTACAAATT
GCGGGCAGCG ATCCACAGCT GATGGCCGAA GCAGCGCAGT TCAGCGTTGA AAACGGTGCG
CAAATCATCG ATATCAACAT GGGCTGCCCA GCCAAAAAAG TAAATAAAAA GCTCGCGGGC
TCTGCACTGC TGCGCTATCC GGATGTGATT GAAGACATCT TGAAAGCGGT AGTGAATGCA
GTGAATGTGC CAGTCACACT CAAAACCCGA ACGGGTTGGG ATACAGACAA TAAAAACTGT
CTCTCGATTG CTCAATTAGC CGAAGACTGC GGCATACAAG CACTGGCTCT CCATGGACGA
ACTCGTGCCT GCATGTACAA AGGTGAGGCG GAATACGACA GCATTAAAGC GGTCAAAGCG
GCTGTGAGCA TTCCGGTTAT CGCTAACGGT GATATCGATA GCCCGGAGAA AGCACGCTAC
GTACTGGAGT ACACCGGTGC AGACGCTTTA ATGATTGGCC GTCCTGCCCA AGGACGACCA
TGGATTTTTC AGGAAATCCA ACACTTTTTG GAACACGGCA CCACAATGCC AGAACTTCCA
ATTTCGGAAG TGAAAGACAT CATGCTTGGT CATGTAACCG CACTCCATCA GTTTTATGGA
GAGTACTTAG GCCCACGAAT TGCGCGCAAA CACGTGAGTT GGTACCTGCA AGAGCATGAA
CAAGCGAGTG CGTTTCGCCG TACCTTCAAC GCCATTGAGA CTGCTGACCA GCAACTCGAT
GCGCTCGAAG GGTATTTTGA TAACGTTGCA TCATAA
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| Protein sequence | MLVRSCEDVL KIGNHQLKNN LIVAPMAGVT DRPFRELCLR YGAGMAVSEM MSCNPALWKT
AKSQNRMVHE GESGIRSVQI AGSDPQLMAE AAQFSVENGA QIIDINMGCP AKKVNKKLAG
SALLRYPDVI EDILKAVVNA VNVPVTLKTR TGWDTDNKNC LSIAQLAEDC GIQALALHGR
TRACMYKGEA EYDSIKAVKA AVSIPVIANG DIDSPEKARY VLEYTGADAL MIGRPAQGRP
WIFQEIQHFL EHGTTMPELP ISEVKDIMLG HVTALHQFYG EYLGPRIARK HVSWYLQEHE
QASAFRRTFN AIETADQQLD ALEGYFDNVA S
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