| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2675 |
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| Symbol | cas5e |
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| ID | 5135882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2834195 |
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| End bp | 2834911 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640534123 |
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| Product | CRISPR-associated Cas5 family protein |
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| Protein accession | YP_001218553 |
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| Protein GI | 147674174 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCGAAA AAAACGCCTA TTTGCTCCTG TGGTTGGAAG GACCATTGCA AGCGTGGGGG
CACGATTCTA AGTTTGGAGT ACGCAATACA CTTAATTTCC CGACTCGTTC GGGGATCTTG
GGCTTGCTTT GTTGTGCCCG TGGAGCTGGT GGTGAGCAAC GTGAGTGGTT AGAAAAAATG
TCGCCCATGG CGATGGAGGT TTTAGCCTTT GAGCGTAGCG ATGCTGAGGG AGAACCGATA
ATGCGGGAAG CTACATTGAG AGATTTCCAC ATGGTAGGCA GCGGTTATGA TGATGCTGAC
CCTTGGCAAA ATTTGCTCAT TCCTAAAACA GCACAGGGAA AGAAGCCTAA TGGGGCAGGT
ACTAAAATGA CTTATCGTTA TTACCTGCAA GATGCCCTCT TTGCAGTGAT TCTAGAAATT
CCTGCTGATG ACAAGGAAGC TTTGGAGGAT GCGCTACAGA ATCCAAGATG GGATCTCTAC
CTTGGCCGTA AAAACTGCGT ACCGACAGAG CTAATCTACC AAGGTGTTTA TCATTCAACT
GAGACAGCAA GGCAGCGTGC GCAAGAGCTG GCGGAGAATA AATGCCGTCA CTTGAGTTAT
ACCATTGTCG AAGGTGAGCA GGAGGGCGGA GAAGTGTTCA CTCTTAATGA TGTTCCCGTG
CAATTTGGCG TGTCTAAACG TTATCGAGAT CGGCGTGTGA CGTTATTGGA GCACTAA
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| Protein sequence | MCEKNAYLLL WLEGPLQAWG HDSKFGVRNT LNFPTRSGIL GLLCCARGAG GEQREWLEKM
SPMAMEVLAF ERSDAEGEPI MREATLRDFH MVGSGYDDAD PWQNLLIPKT AQGKKPNGAG
TKMTYRYYLQ DALFAVILEI PADDKEALED ALQNPRWDLY LGRKNCVPTE LIYQGVYHST
ETARQRAQEL AENKCRHLSY TIVEGEQEGG EVFTLNDVPV QFGVSKRYRD RRVTLLEH
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