| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2674 |
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| Symbol | cse |
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| ID | 5136212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2833148 |
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| End bp | 2834191 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640534122 |
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| Product | CRISPR-associated protein, Cse4 family |
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| Protein accession | YP_001218552 |
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| Protein GI | 147673502 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCACA CACTAAAAAA TACGCGCATT GAGTTCCATA TTTTACAGTC ATTCCCGGTC
ACTTGCTTAA ATCGAGACGA TGTCGGCGCG CCGAAATCAG CCATTGTTGG TGGTGTTTCG
AGAGCGCGAG TCTCCTCTCA ATGTTGGAAG CGCCAGGTTA GGTTGGCCAT GTCGGAGTTT
GGTATTCAGT TGGGTGTGCG CAGTAAAAAA GTCGCTGCAC TGTTGCAACA GCACTGTTTA
TCTTTGGGGG CGAGTGAAGA TCAAGCCAAC GCATGTGGCG AGGTGATGGC TGGATTTTTT
GCTGACGATA CCTTGTTGTT TATTAGTGAC AGTGAAGCAA AAGCCTTTGC CGCGTATGCA
CAAGAAAAAG AGTTTGACGC CAAATCACTC AAAGACAAAG AGTTAGTAAA AGTGGCTAAA
AAAGTTGTGA ATAAGACGCT TGATGCGCTC GATATTGCCT TGTTTGGTCG GATGGTCGCA
AAAGCTGCTG AAATGAATGT CGAAGCGGCC GCCTCATTTG CTCATGCCAT CTCAACACAT
AAAGTCAGCA ACGAGTTAGA ATTTTTTACC GCAGTTGATG ACCATAAAAG TGAAGAAGAA
AGTGGCTCTG CACACATGGG CACTTTGGAG TATAACTCTG CAACCTATTA CCGCTATGTC
AGTTTAGATT TGGGTCAACT TCAACAAACG CTCGGTGATG ATGCCGATCT CAGTACCGCG
CTCGAAGCGT TTGTTAAAGC ACTTTATGTT GCGGTGCCTA ATGCTCGTCA AACCACGCAA
TCAGGCGCTT GTCCTTGGGA ATATGCTCGC GTATTGGTGC GTAAAGGACA ACGCCTACAA
GCCTCGTTTG AACAACCTGT TCGTGCTGCA GGGGAAGGGT ATTTATTACC GAGTAAAAAA
GCACTTCAAA ACTGGCTAGA GCAGCGTGAA AAACTCTCCG GTTCTCTATT TGCGAAGCAG
GGCGATTATG AATGGGGTGA TGACTTAGAC TACAGCATTG ATCATTTGAT TGCCGATCTT
CAATCTCACT TAATGGTGAG GTAA
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| Protein sequence | MNHTLKNTRI EFHILQSFPV TCLNRDDVGA PKSAIVGGVS RARVSSQCWK RQVRLAMSEF
GIQLGVRSKK VAALLQQHCL SLGASEDQAN ACGEVMAGFF ADDTLLFISD SEAKAFAAYA
QEKEFDAKSL KDKELVKVAK KVVNKTLDAL DIALFGRMVA KAAEMNVEAA ASFAHAISTH
KVSNELEFFT AVDDHKSEEE SGSAHMGTLE YNSATYYRYV SLDLGQLQQT LGDDADLSTA
LEAFVKALYV AVPNARQTTQ SGACPWEYAR VLVRKGQRLQ ASFEQPVRAA GEGYLLPSKK
ALQNWLEQRE KLSGSLFAKQ GDYEWGDDLD YSIDHLIADL QSHLMVR
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