| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2672 |
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| Symbol | cse |
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| ID | 5137239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2831926 |
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| End bp | 2832486 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640534120 |
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| Product | CRISPR-associated protein, Cse2 family |
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| Protein accession | YP_001218550 |
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| Protein GI | 147674986 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACAACA ATCCTGTGGT AACGCGTGAT AGCGCCGTTG CTCAGACATC CAAAACAGGT
CGATTTATCA CTTATGTTAT TGAGCGAATT CAAAAAGACA AAGGGTTTGC GGCTCGTTTG
AAACGAGCGG ACAACCAGAC TACCGAGTAC CAAAGTTGGG AGTTATTAGC GAGCTTCGAC
GTCGATTTAG AAAAAGAGTG GGAGCGCCTG CCCTATTGTA TTGTTGGGGC GGCGCTTGCT
AAGGCAAAAC CGAAAAGTAA CGGCCATCTT ACCCTTGGAC AGGCGATAGC TGCTTGCTAT
GACGATGGGA ATCAGTCCGA GCAAGCCAAA GCACGTTTAC GTCGCTTGCT AGCGTGTTCG
AGTTCGACAG AAGTGTGCCG TATTCTGCGC CCGCTACTTA CTTTGATTGA AAGCAAAGGC
GTTGCATTGA ATTACCACCA GCTACTGGAA CAACTGCTCT GGTATCACGG CAAAGCGCAA
GACTCGATTC GTGCACGCTG GGCGCAGGAT TTCTATCGTC GATCTGCCAG CACCCAGGCC
CATGAGGTGA ACTATGAGTG A
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| Protein sequence | MDNNPVVTRD SAVAQTSKTG RFITYVIERI QKDKGFAARL KRADNQTTEY QSWELLASFD
VDLEKEWERL PYCIVGAALA KAKPKSNGHL TLGQAIAACY DDGNQSEQAK ARLRRLLACS
SSTEVCRILR PLLTLIESKG VALNYHQLLE QLLWYHGKAQ DSIRARWAQD FYRRSASTQA
HEVNYE
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