Gene VC0395_A2669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2669 
Symbol 
ID5135808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2826459 
End bp2827451 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content47% 
IMG OID640534117 
ProductFic family protein 
Protein accessionYP_001218547 
Protein GI147673973 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTTTGA TGAGCTACCA ACCACCTTAC ACCATTACCA ATCAGATTCT TTCGCTGGTG 
GCGCAAATCA GCGAATGCTT GGGGCGCCTG TCTGTCAATT GTGCTTCACC TCGTGAGCTG
AAGCTGCGCA AGGTTAACCG AGTGAGAACG ATTCAAGGCT CCCTTGCTAT TGAAGGGAAT
GAACTCTCTC AAGAGCAGAT AACCGCCTTA CTGAATGGTA AGCGGGTACT CGCGCCCAAA
AAACAGGTTC AAGAAGCACT GAATGCGATC AATGTTTACC AAGAGTTGAA TTCATGGTCT
TCACATCGTG AAGTTGACTT GCTGCAAGCC CACGAAGTGT TAATGATTGG CTTGCAGTCT
GTGATTGGTC GTTATCGTAT GGATGGTGTT GGTGTTTTCA AGGATGGGCA GGTATTGCAT
ATGGCCCCGC CTGCGGAGCG CGTGCCAAAA CTGATGAGTG AGTTATTTCA GTGGTTGGCC
AATGACAATA GCCACCCGCT TATTCGCAGT TGTGTGTTTC ATTATGAGTT TGAATTCATT
CACCCATTCT CGGATGGAAA TGGACGCATG GGCAGGCTTT GGCAAACCTT GATATTGTCC
GAATGGAATC CTCTCTTTGC TCATTTACCT GTTGAAAGCT TTATCTATGA GAATCAGCAA
GCCTATTATG ATGCGATTAA TCGCAGTACG CTGAAAGCCG ATTCAGAGCC GTTCATTGCC
TTTATGTTGC AGATGATCTT GAACGCTTTG CAAGAAACAG AAGCGACCAC CCCTCAAGAT
GCCCCCCAAG TTGCCCCTCA AGTTAAACAA CTGTTGGACG TGCTTGAAGG GGAAATGCTT
AGAGAAGAAA TTCAAGCAAT GCTTGGGCTG AAAGATAGAA AATCCTTTCG TGATCGCTAC
TTAAAACCTG CACTTGAGGC TGGCTTAATC GAAATGACCC TCCCAGATAA ACCCACCAGC
AAGGTACAAC GGTATAGGAA GAGGGGCGTT TGA
 
Protein sequence
MSLMSYQPPY TITNQILSLV AQISECLGRL SVNCASPREL KLRKVNRVRT IQGSLAIEGN 
ELSQEQITAL LNGKRVLAPK KQVQEALNAI NVYQELNSWS SHREVDLLQA HEVLMIGLQS
VIGRYRMDGV GVFKDGQVLH MAPPAERVPK LMSELFQWLA NDNSHPLIRS CVFHYEFEFI
HPFSDGNGRM GRLWQTLILS EWNPLFAHLP VESFIYENQQ AYYDAINRST LKADSEPFIA
FMLQMILNAL QETEATTPQD APQVAPQVKQ LLDVLEGEML REEIQAMLGL KDRKSFRDRY
LKPALEAGLI EMTLPDKPTS KVQRYRKRGV