| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2664 |
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| Symbol | |
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| ID | 5135801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2819976 |
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| End bp | 2821352 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640534112 |
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| Product | putative gluconate permease |
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| Protein accession | YP_001218542 |
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| Protein GI | 147674889 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.909443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCCCT TACTACAAAC CTCTGATCCT ACGTATCTAT TAACCGTGGC GGCGGTCGCC
ATTATTGCGC TACTGCTGCT GATTATTCGT TTTAAAATCC ACGCTTTTGC TTCACTGACC
TTAGTCAGTT TAGGCACCGC CATTGCCACT GGCGTGGCGT CTGACAAAGT GGTGTCGACC
ATGATGACAG GCTTTGGTGG CACGCTGGCT TCGGTCGCGC TGCTGGTCGG CCTTGGCGCT
ATGATTGGTA AAATCTTGGA AGTGACGGGC GGTGCGAAAG TGCTGGCAGA CACGCTGATC
GGCCGCTTTG GCGAGCAGCG CGCACCGTTT GCGCTCGGCG TGGCATCGCT GCTGTTTGGC
TTCCCCATCT TCTTTGATGC GGGCCTGATT GTGATGATGC CGATCATCTT CAGCGTCGCG
AAACGCTTTG GTGGCTCACC TCTTAAATAC GCGCTGCCTT CAGCAGGTGC GTTTGCGGTC
ATGCACGCCT TTGTGCCACC GCATCCGGGG CCGGTTGCAG CGGCAGAACT GCTCGGCGCA
AACATCGGCT TGCTGCTGAT TGTTGGCTTA CTCGTAGCCA TCCCGACTTG GTACTTGGGC
GCTTACCTAT TTGGTCTATA TGCCGGTAAG AAATTCAATA TTCCTTTGTC GAAAGCCTTC
TTCAATACCG ATGCGATCAT TGACGAAGCC AAGCTACCCA AATTTGCCAC GGTCATGACT
ATTCTGGTGC TGCCGGTGCT GCTGATTTTT ATGGATACCG GTTTGAACAC CCTTGCGGTC
GCGGGCATGA TTGATGGTAA AGCTCCCGCA GTCGAATTCC TGCGTATGCT GGGTAAAACG
CCGATTGCTC TGCTGATCAC TCTGCTCGTC TGTATCGCAG CGTTCGCCAA AGATTACGGC
ATGGCACGCC TAGAAAAACT GTGTGGTGAT TCGCTTGCCC CCATCTGCGC GGTGATTTTA
GTCACCGGTG CGGGCGGCAT GTTCGGTGGC GTACTGCGCG CAAGCGGCAT TGGTAGCGCA
CTGGCTGGCG TGCTGTCGGA TACCGGTATG CCCGTTGTGG TCGCCGCGTT TGTGATTGCG
ACCTGTTTAC GCGTCGCGCA AGGTTCGGCC ACGGTCGCTC TGACCACGAC CGCCGCCCTG
ATTGCACCGA CGGTGGCAGC GACCACAGGC CTGTCTGAGC TTGACCTGTG CTTTATCGTG
ATTTCGATTG CCGGCGGTGC TACTGTGCTT TCACACTTTA ACGATTCTGG TTTCTGGCTG
GTGTCGCGTT TGATGGAGAT GGATGAGAAA ACCACTCTAA AAACGTGGAC TGTGATGGAA
ACCCTTTTGG GCGGTATCGC CTTCCTGATT GTGGCAACAC TCAGCTTTAT TCTGTAG
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| Protein sequence | MDPLLQTSDP TYLLTVAAVA IIALLLLIIR FKIHAFASLT LVSLGTAIAT GVASDKVVST
MMTGFGGTLA SVALLVGLGA MIGKILEVTG GAKVLADTLI GRFGEQRAPF ALGVASLLFG
FPIFFDAGLI VMMPIIFSVA KRFGGSPLKY ALPSAGAFAV MHAFVPPHPG PVAAAELLGA
NIGLLLIVGL LVAIPTWYLG AYLFGLYAGK KFNIPLSKAF FNTDAIIDEA KLPKFATVMT
ILVLPVLLIF MDTGLNTLAV AGMIDGKAPA VEFLRMLGKT PIALLITLLV CIAAFAKDYG
MARLEKLCGD SLAPICAVIL VTGAGGMFGG VLRASGIGSA LAGVLSDTGM PVVVAAFVIA
TCLRVAQGSA TVALTTTAAL IAPTVAATTG LSELDLCFIV ISIAGGATVL SHFNDSGFWL
VSRLMEMDEK TTLKTWTVME TLLGGIAFLI VATLSFIL
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