| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2662 |
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| Symbol | |
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| ID | 5137781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2817095 |
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| End bp | 2819137 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640534110 |
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| Product | TonB system receptor |
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| Protein accession | YP_001218540 |
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| Protein GI | 147673813 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0618091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCATT TTACTCGCTC AAGAACCTGG GTCAGTCTGG CCGTTTTCGC CGCTTGTGCC
CCCGCCCATG CCGAACAAGA AACCTTGGTC ATCACCAGTC AACAAAGCCA ACTGCCGGAA
GTCGCCACCG CAACCCGCAC CGCCACTCCG GCTAAACTGG TGCCGCAAAC CATTGATTCA
CTTTCTGCGG AAGAGTTGAC CGCGTTTGGC GCTCCCAGCC TAAGCGAAGC TTTAGCTGGG
GTACCGGGGG TCAACGCCAA CGGCGATACC CGTTTTGACG GCATCAATAT TCGTGGATTT
TCCGCCAGCA ACGATTTTTA TCTCGATGGT TTTCGTGATG ATATGCAGTA CACCCGCGAT
CTCGGCAACA TCGAGCGTAT CGAAGTTCTC AAAGGCCCAG CGGCGGTGTT GTATGGCCGT
GGTAGTACAG GGGGGATCGT CAACCGCGTC AGCAAAGTGC CACACGCAGG TGATGCCGCG
AGCGTTTCTG CACGCATTGG CAGCCATGAT TACCAACGCC TTGCCGCCGA TCTCAATGGT
GAGGTCAATC AGCAAGTACA AGTTCGCCTC AATATTGCTC AAGAAGATTA CGGCAGTTTC
CGCCATGGCG TGGAAGGCAA ACGCACTTTG CTTGCTCCGT CTCTGAACTG GGACATCAAT
GATGATGTGA GCTGGCTTAT CCAGTATGAG CAACACTCCC ATAATCGCGT GCCAGATCGT
GGTATTCCGG CGGTGAACGG CTCTCCTGCT GAGGTTCCTG CGAGCAGTGT TTACAGCGAT
ACCAGCCGTG ACTTTATTGA TGATGATGTG GCCACCACGC GCTCACGCAT TACTTGGGCA
TTCCACCCAG AATGGCAACT GCGCCAACAA CTGAGCTACA CCAAGCTCGA TAGTCAGTTT
GATAACACTT ACGTAGCTCG CGTCAGTGGC GACCAAGTCA CGCGTCAACG CTTCCAACAA
GATCTGCAAG CCAACAACCT GATCAGCAAT ACCGAAACCG AAGGCACCTT CAATACGGGC
CCGATTGCTC ACCGAATTCT GATAGGTCTA GAGCAAGGCT GGCAAGAGCG CTCGCCGAAA
CTGTATCGCA ACGCCAACAG CATCCCAAGT GGCAACCTGT ACCAACCTGA GTCACTGCCG
ACCTACAACG GACCTATGTC AGTATTTAGT GATGCCACTC ATAAAGTGCG GAGCTACGGT
ATTTATGTCC AAGATCAACT GCAATGGGGA GATTGGATTG TGTTGGCAGG TCTGCGTCAC
GATGATTTCA CCGTCACGAC TCATCGCCAC GATACCAACA AAGAAGAGAC CATCTCATCC
AACAGCTTAA GCCCACGTTT AGGTGTGGTA TGGACACCTG TGCAAGAGCA TGCGTTGTAC
GCTTCCTACT CACAAACCTA TTCTCCGGTT GGTGGTGGCG TTATTGGCAT TACGCCGGGA
GACAAACATA ACCACCTCGA TCCTGAGCAC TCACGTCTGT ATGAAACTGG CGTCAAAAGC
GATTGGCTAG AGGGACGCAT CTCAACCACT TTATCCGTCT ATCGCTTAGA AATGTATAAC
CGCCGTATGC GTGATCCGAA TGATCAGGAG CGTATTATTC TCACCGGATT ACAACGTACC
GATGGTATTG AGCTGAGCAG CCGTGCACTT CTCACCGATG AATTTTCTCT GCGTGGCGGC
ATTGGTCTGC AAGATGCAAA ATACGTCGAA GCTGATGCCA GTGAGCAAGG TAAACGCCCA
ACCAACGTAT CGCGCCTCAA TGGTGAGCTG TTTGTCGCTT ATCAATCAGC AAGCGATGGT
TGGTTTGGTG AGACCGGTTT TGTGGCGGTA GGCGATCGCT ATGCCGATCG TACTAACACC
ACCAAACTAC CCGGTTATGC CCGTTTCGAT GCGCGTCTCG GCTACCAATG GCAAGCTTGG
CGCACTCAAC TGAGCGTAGA AAACCTGCTC GATAAGGATT ACTACCTGAG TGCCACCAGC
AGCACACAAA TTCAGCCGGG TGCACCGCGT GAGTTCTACC TCACAGCGTC TTACCAGTTC
TAA
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| Protein sequence | MSHFTRSRTW VSLAVFAACA PAHAEQETLV ITSQQSQLPE VATATRTATP AKLVPQTIDS
LSAEELTAFG APSLSEALAG VPGVNANGDT RFDGINIRGF SASNDFYLDG FRDDMQYTRD
LGNIERIEVL KGPAAVLYGR GSTGGIVNRV SKVPHAGDAA SVSARIGSHD YQRLAADLNG
EVNQQVQVRL NIAQEDYGSF RHGVEGKRTL LAPSLNWDIN DDVSWLIQYE QHSHNRVPDR
GIPAVNGSPA EVPASSVYSD TSRDFIDDDV ATTRSRITWA FHPEWQLRQQ LSYTKLDSQF
DNTYVARVSG DQVTRQRFQQ DLQANNLISN TETEGTFNTG PIAHRILIGL EQGWQERSPK
LYRNANSIPS GNLYQPESLP TYNGPMSVFS DATHKVRSYG IYVQDQLQWG DWIVLAGLRH
DDFTVTTHRH DTNKEETISS NSLSPRLGVV WTPVQEHALY ASYSQTYSPV GGGVIGITPG
DKHNHLDPEH SRLYETGVKS DWLEGRISTT LSVYRLEMYN RRMRDPNDQE RIILTGLQRT
DGIELSSRAL LTDEFSLRGG IGLQDAKYVE ADASEQGKRP TNVSRLNGEL FVAYQSASDG
WFGETGFVAV GDRYADRTNT TKLPGYARFD ARLGYQWQAW RTQLSVENLL DKDYYLSATS
STQIQPGAPR EFYLTASYQF
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