| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2626 |
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| Symbol | rfbH |
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| ID | 5137884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2779321 |
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| End bp | 2780115 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640534075 |
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| Product | lipopolysaccharide/O-antigen transport protein |
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| Protein accession | YP_001218505 |
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| Protein GI | 147674342 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATTTTT TGGGAATGAA AATGCTTAAA GATATAGTTT CGGTTTTTTA TAATTGGCGT
ATTGTGCATC TATTGGGGGT TTCTACACTT AGAAGTAGAT ACTCTCGGTC TAAATTTGGA
CAAACTTGGT TAAGCATCAC AATGTTCGTA CAAATTCTCT GTATAGGGCT AATTTGGTCT
TTAATATGGA GAATGGGAGT AGATGATTAT TTACCATATG TCGGTGTTGG ACACATAATT
TACTTGTTTT ATACTCAAAC AATTAACGAA AGCACAGGAA TCTTCGTTGC AGATGCTCGA
GTATACCTAA ATGATAGGCA ACCTTTTATG CTTTCAGTCG GTGCTCACAT ATATCGGAAC
GTGCTGATTC TTCTTCATAA TATACCAACC ATATTTTTGC TTGTCATATG GTCTAGCTCG
GCAAACTTTG AATTTAGTTT TATGTTTGTC ATTTCGTTGA GTTTAAGTCT GTTTTTCGTC
CTATTTGCTA GCTATTTTTG TGCTGTTATT TCAACGAGAT TTAGAGACTT AATCCAGCTG
ATTGGGCTTT TGATGCAGTT AGCTTTCTTT GTAAGTCCTG TCATGTGGAA AGTAAGCTTT
CTACCCGAAC AATATCAAAA CTATGTGTAC ATAAATCCAT TTGCTTCGCT ATTGGAATTA
ATTAGAAATC CGATAATAGG AATCGACGTT AATCCTTTAG CATTTGTTTC GTTAGTAGCA
TGGACTTTTA TAATTGGTAT GGTCAGCTAC TTCTCGTACA AAGTACTCGA TAAAAAAGTC
ATTTTTTGGG TGTAG
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| Protein sequence | MYFLGMKMLK DIVSVFYNWR IVHLLGVSTL RSRYSRSKFG QTWLSITMFV QILCIGLIWS
LIWRMGVDDY LPYVGVGHII YLFYTQTINE STGIFVADAR VYLNDRQPFM LSVGAHIYRN
VLILLHNIPT IFLLVIWSSS ANFEFSFMFV ISLSLSLFFV LFASYFCAVI STRFRDLIQL
IGLLMQLAFF VSPVMWKVSF LPEQYQNYVY INPFASLLEL IRNPIIGIDV NPLAFVSLVA
WTFIIGMVSY FSYKVLDKKV IFWV
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