| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2624 |
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| Symbol | rfbE |
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| ID | 5136509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2776858 |
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| End bp | 2777961 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640534073 |
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| Product | perosamine synthase |
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| Protein accession | YP_001218503 |
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| Protein GI | 147673420 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCCTG TATACGAACC AAGTTTGGAT GGAAATGAGC GTAAATATCT AAACGATTGC
ATTGATTCCG GTTGGGTATC CTCAAGGGGG AAATATATTG ATCGCTTCGA AACTGAGTTT
GCGGAGTTTT TAAAAGTAAA GCACGCCACA ACAGTATCTA ATGGAACAGT TGCGCTACAT
TTGGCAATGA GCGCGTTGGG AATAACTCAA GGCGATGAAG TGATTGTACC AACATTCACT
TATGTTGCCT CGGTTAATAC CATAGTCCAG TGTGGTGCGT TACCCGTTTT TGCTGAAATC
GAAGGTGAGT CTCTACAAGT GAGCGTAGAG GACGTTAAAC GTAAAATAAA TAAAAAGACA
AAAGCAGTTA TGGCCGTTCA CATATATGGA CAAGCTTGCG ATATTCAATC TTTAAGAGAT
CTGTGTGATG AGCACGGCCT CTATTTAATT GAAGACTGTG CAGAAGCAAT AGGTACTGCT
GTTAATGGCA AAAAAGTAGG TACATTTGGC GATGTGTCAA CGTTTAGTTT CTTTGGAAAT
AAAACCATCA CATCGGGCGA GGGTGGTATG GTTGTGTCAA ACTCAGACAT AATTATAGAT
AAATGTTTAC GCTTAAAAAA CCAAGGGGTA GTGGCAGGGA AGCGCTACTG GCATGACCTA
GTTGCGTATA ACTATAGAAT GACGAATCTA TGTGCTGCGA TTGGTGTTGC TCAGCTTGAA
AGAGTTGATA AAATTATAAA GCGCAAGCGT GATATAGCTG AAATTTATAG GTCTGAACTC
GCTGGACTAC CAATGCAAGT GCACAAAGAG TCTAATGGAA CTTTCCACTC ATATTGGTTG
ACGTCTATTA TATTAGACCA AGAGTTTGAA GTGCACCGCG ATGGGTTGAT GACCTTCTTA
GAAAATAATG ACATCGAGTC TAGACCATTT TTCTATCCTG CTCACACGCT GCCAATGTAC
GAGCATTTGG CAGAAAAGAC AGCTTTTCCG TTATCAAATA GCTACTCTCA TCGAGGTATT
AATTTACCCA GTTGGCCAGG GTTATGCGAT GATCAAGTAA AAGAAATTTG CAACTGTATT
AAAAATTATT TCAACTGTAT TTGA
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| Protein sequence | MIPVYEPSLD GNERKYLNDC IDSGWVSSRG KYIDRFETEF AEFLKVKHAT TVSNGTVALH
LAMSALGITQ GDEVIVPTFT YVASVNTIVQ CGALPVFAEI EGESLQVSVE DVKRKINKKT
KAVMAVHIYG QACDIQSLRD LCDEHGLYLI EDCAEAIGTA VNGKKVGTFG DVSTFSFFGN
KTITSGEGGM VVSNSDIIID KCLRLKNQGV VAGKRYWHDL VAYNYRMTNL CAAIGVAQLE
RVDKIIKRKR DIAEIYRSEL AGLPMQVHKE SNGTFHSYWL TSIILDQEFE VHRDGLMTFL
ENNDIESRPF FYPAHTLPMY EHLAEKTAFP LSNSYSHRGI NLPSWPGLCD DQVKEICNCI
KNYFNCI
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