| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2606 |
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| Symbol | |
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| ID | 5136692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2757200 |
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| End bp | 2758273 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640534055 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_001218485 |
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| Protein GI | 147673782 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.21938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTATGG CATTGTTTCA ATCAGCCCCA CACTCCCTCT GTATCCTGCG TTTATCGGCG
ATTGGTGATG TCTGTAATAC GATAGCTGCC GTACAAGCGA TTCAACGCCA ATGGCCGCAA
ACACGCATCA CTTGGGTGAC GGGTAAACTG GAAGCAGAAC TTATCCAATC TCTGCCCGAT
ATTCAGGTCA TCGTGTTTGA TAAAAAACTC GGATGGCGTG CTTATACTCA GCTTTGGCAG
CAATTAAAGT CCGAGCGTTT TGATGCGCTG CTGCACATGC AGTACGCTTT TCGCGCCAGC
ATTGCGACTT TGGGGATCAA AGCGCGCTAT AAACTGGGTT TTGATGCAGC GCGCAGCCAA
GATTTTCAAA CTTGGTTTAC CAATGTCAAA GTTCCCTCAC CGGACAAAAT GCACGTCTTA
GATGGTTTAT TGGCATTCGT TGAGCACTTA GGTATTCGCG ATATTGAGCC TAAGTGGTCA
CTCACCTGCC AACCTGACGA TCTGACATGG GCTGAGGCGC AGTTTCAGCC CGAGCAGCCT
CGCTTAGTTG TGGTGCCCGG AGCAAGCAAA GCTTATAAGA ATTGGACGGC AGAGGGCTAT
GCAGCAGTTA TTGAACATGC CCAACAACAA GGCTGGCAAG TGATCTTGGC CGGAAGCCCA
GCACAAGTTG AGCGCGATCT GGCCGCGCAA GTGGAGCAAG CACTCGCTCA CCCCGTCTTA
AACTTGGTGG GAAAAAGCAC GCTGCAACAG ATGCTCGCAC TGATCGCAAA GGCAGATTTG
GTGATCGCTC CCGATACAGG CCCTGCGCAT ATGGCTAATG CCATGAATAC ACCAATCATT
GGTCTCTACG CTCACCATAA TCCTGAGCGC ACAGGTCCAT ACCATTATCG CCACTATGTC
GTTTCCGTTT ACCAAGAAGC TTTACTTGCG GAAACCGGTA AAACGCCGCA GCAGGTTGAT
TGGCGCACTC GGGTTAAAGA CCCCAATGCG ATGCAGCGCA TCACTGCGCA ACAAGTGATT
GCGATGTTTG AGCGTGCCGC TGCTGACATC ATGGCCACAC AGGTGAACGA TTGA
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| Protein sequence | MAMALFQSAP HSLCILRLSA IGDVCNTIAA VQAIQRQWPQ TRITWVTGKL EAELIQSLPD
IQVIVFDKKL GWRAYTQLWQ QLKSERFDAL LHMQYAFRAS IATLGIKARY KLGFDAARSQ
DFQTWFTNVK VPSPDKMHVL DGLLAFVEHL GIRDIEPKWS LTCQPDDLTW AEAQFQPEQP
RLVVVPGASK AYKNWTAEGY AAVIEHAQQQ GWQVILAGSP AQVERDLAAQ VEQALAHPVL
NLVGKSTLQQ MLALIAKADL VIAPDTGPAH MANAMNTPII GLYAHHNPER TGPYHYRHYV
VSVYQEALLA ETGKTPQQVD WRTRVKDPNA MQRITAQQVI AMFERAAADI MATQVND
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